Gene Rmet_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4243 
Symbol 
ID4041101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp830688 
End bp831605 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID637979666 
ProductCrp/Fnr family transcriptional regulator 
Protein accessionYP_586379 
Protein GI94313170 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.286118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA GCCGCCGGTA TCGAACCGGA ATAGACTCAG CCGACGATGC TGGCGGGAGG 
CACCACACGT GCCGCCCCCG CATCGGCAAC TCACCAAAGA TTGAGCAGAT GGCCGTAGCC
ATGAGCACGG AAATACCTGA GTGCCGGGCC CATATACCAC CGGTGCTGCG GCCTCACGCC
GACGCAGTGC CGGTCACTCC TGGCCCGGAT ACTAGCCTGC TGATCGGCGC CGTGCTGCGC
CAGGCGGCCT GGGCTGCAGC CTGCCAGCCA TCAACGGTGC AAGCCTTCGC GAGGGGTGGC
GTCGTCCGGC ATATGAAGCG GCACGCAATC GTGGTGCGAC GCGGTGACCC GGTCAGGCGC
CTGGGCATCG TGCTATCAGG CATCCTGCAA GCGGGGGTTC ATGCTTGCAA CGGCAAGCGC
ATGACCTCCG CCTATATGGC TTCAGGCCAA CTGTTCAATC TCGTGCCATT TCTGGATGGC
GGCATGGCGT CCAAGGACTT CGTGGCGCAC ACGGACCTAA CGGTTTGCTG GCTGAACAAG
TCGCTGGTCG AGACTGCCAT GTCGACCGAC GCCGAGTTGC AGCGCGCCTT CATCCAGGTC
TTGTGTGCAC GTTCGCGCCA GTGCCTGTCG GACCGTGCGG GCCTGCTGCT GCTGACACTC
CGGCAACGGT GCGCCGAGGT CCTGCTGATG CTCGCCGCTG ACTATGGCAT ACCGCGTCAA
GAAGGGGTCT CGCTCACGCT GCGCATGAGC CAAGCGGAAT TCTCGGATCT GGTGGGCTGG
TCCCGGCCGA AGGTGAACCA GGAACTAAAA CGCATGGAAG CGGAATCGCT TATCCAGATT
TCGTACTCTC ACATACTGAT CCTGGACATG GCGCGGCTCA GGACGGACGT TGCCGGGGAG
GGCGGCGGTC CGTACTGA
 
Protein sequence
MDQSRRYRTG IDSADDAGGR HHTCRPRIGN SPKIEQMAVA MSTEIPECRA HIPPVLRPHA 
DAVPVTPGPD TSLLIGAVLR QAAWAAACQP STVQAFARGG VVRHMKRHAI VVRRGDPVRR
LGIVLSGILQ AGVHACNGKR MTSAYMASGQ LFNLVPFLDG GMASKDFVAH TDLTVCWLNK
SLVETAMSTD AELQRAFIQV LCARSRQCLS DRAGLLLLTL RQRCAEVLLM LAADYGIPRQ
EGVSLTLRMS QAEFSDLVGW SRPKVNQELK RMEAESLIQI SYSHILILDM ARLRTDVAGE
GGGPY