Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4101 |
Symbol | bugT |
ID | 4040959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 669510 |
End bp | 670496 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979524 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_586237 |
Protein GI | 94313028 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0889008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG CGAAGGCATC GAGGGTATGC ATCGCCGCCG CGTTGCTGGT GCCGATGACG CTGGCGTGGG CGCAGGGTCC TGCCGCGTAT CCAACCAAAC CGATCCGGCT GATCGTCGGT TTCCCGCCGG GCGGTGGTGC GGACGCTGTG GCGCGCATCG TCGCGGAAAG AATGTCCCGG GACCTGGGGC AGAGCATCAT CATCGACAAC AAGCCCGGCG CCGGCACGAC CATCGCGGCG GAAGCGGCAG CCCGTGCCGA GCCCGATGGC TATACGGTCT TCATGGGTAG CGCGAACCTC TTCGGAGCGG ACAAGGTCCT CTACAAGAAG ATTCGCTACG ACGGGCAGAA GGACTTCACG CCGATCTCGC GCTGGACCAT CGCGCCGATG ATCCTGGCGG TGAATAACGA TATCGGTGTG AAGTCGGTGC AGGAACTGAT CGCCAAGGCG AAGCAGAATC CCGGCAAGTA CTTCTATGCG TCGTCCGGCA GCGGCGGGGC GCCGCATATG GCTGGCGTCT ACTTCAACAA GCTCGGCGGC ACGCGGATGG AGCACGTGCC GTTCAAGGGC GGCGCGCCGG CGGTGACGGC CGTGATTGCT GGCGATGCGC AGATGATCTT CGCCACGCCG CCGTCGGTGC TGCCGATGGT GGAGACCGGC AAGCTCAAGG CGCTGGCCGT GACGTCGGAG AAGCGGTCGC CGTTGCTGCC GAACCTGCCG ACGGTGTCGG AGAGTGGCGT CAAGGGCTAC GACTTCACGT TCTGGTTTGG GTTGTTTGGC CCGGCCAATC TGCCGCCCGA TGTGGTGCGC AAGCTCTTCA CCGCAAGCCA GAAGGCATTG AGCGATCCCG AGGTGGTGCA GAAGCTTGCG GTGCAAGGCA ATGAGGCGCT GCCTTCTGCG TCGCCGGACG AATTCCGCAA ATGGGCGTTG GCGGAAGGGG CCAAGTCCAA GCAATTGATT GAGCAGTCTG GCGCACATCT GGACTAG
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Protein sequence | MKIAKASRVC IAAALLVPMT LAWAQGPAAY PTKPIRLIVG FPPGGGADAV ARIVAERMSR DLGQSIIIDN KPGAGTTIAA EAAARAEPDG YTVFMGSANL FGADKVLYKK IRYDGQKDFT PISRWTIAPM ILAVNNDIGV KSVQELIAKA KQNPGKYFYA SSGSGGAPHM AGVYFNKLGG TRMEHVPFKG GAPAVTAVIA GDAQMIFATP PSVLPMVETG KLKALAVTSE KRSPLLPNLP TVSESGVKGY DFTFWFGLFG PANLPPDVVR KLFTASQKAL SDPEVVQKLA VQGNEALPSA SPDEFRKWAL AEGAKSKQLI EQSGAHLD
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