| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3902 |
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| Symbol | |
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| ID | 4040755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 447394 |
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| End bp | 448446 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979321 |
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| Product | putative short-chain dehydrogenase |
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| Protein accession | YP_586039 |
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| Protein GI | 94312830 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.371859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGG CGGGCACGAA GCCCACTTTT GTGATTCATG AATTCCAAAG TTTCGGCCGC
CAATTTATCG TATCCAGCTC TGCAATAAAA CGGGCAGGCT TCCCTGTCCG TGCAGACAGC
AAGCCAATGG AGGATACGAT GAGCGGAATG ATGGAAGGCA AGGTAGTGGT GGTAACGGGC
GCCGGTGGCG GTATCGGACG AGGCATTGCC CTGGGCATGG CGGCGGCTGG CGCTCGTGTG
GTGGTCAATG ACCTGGGCGT GTCGATGAGC GGCGAAGGCG GCGATGCCGG CCCCGCGCAG
CGCGTGGTCG AGGAAATCCG CGCGGCCGGC GGCCAGGCCG TGGCCAATAC CGATTCCGTT
TCGACCTGGG CTGGCGGCAA CGCCATCGTG CAATGCGCGC TCGACACCTT CGGTCGCATC
GACGCTGTGG TCAACAACGC CGGCAACCTG CGCGATCGCA TGTTTTTCAA GATGAACGAG
GAAGAATGGC GCTCGGTGAT CGACGTGCAC CTGCACGGCA CCTTCTTCGT CAGCCGTGCG
GCAGCCAACT ATTTCAAGGA TCAGGAGAGC GGCGCCTACG TCAACATGAC GTCGACGTCG
GGGCTGATCG GCAACCTGGG TCAGGCTAAC TACTCCGCGG CCAAGCTGGG CATCGCCGCG
CTGTCCAAAT CGATCGCGCT GGACATGGCC CGTTTCAATG TGCGCTCGAA TTGCATCGCG
CCGTTCGCCT GGAGCCGCAT GACCAGCTCG ATCCCGGCCG AGACGCCTGC GGAGAAGGAG
CGCGTGGCCC GCCTGCAGAA GATGGAAGCC GGCAAGATCG CTCCGGTGGC CGTGTTCCTG
GCCAGCGACG CGGCCAAGGA CGTGAATGCC CAGATCTTCG CGGTGCGTGC CAACGAGATC
ATGCTGATGA GCCAGTCGCG CCCGGTGCGC TCGGTCCATA CCGGCGAAGG CTGGACGCCG
GAAACCGTCG CGGAGATCGC CATGCCCGCA ATGCGTGGCA GCTTCTTCAA GCTCGACCGC
TCGCCCGACG TCATCAACTG GGACCCGATC TGA
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| Protein sequence | MASAGTKPTF VIHEFQSFGR QFIVSSSAIK RAGFPVRADS KPMEDTMSGM MEGKVVVVTG
AGGGIGRGIA LGMAAAGARV VVNDLGVSMS GEGGDAGPAQ RVVEEIRAAG GQAVANTDSV
STWAGGNAIV QCALDTFGRI DAVVNNAGNL RDRMFFKMNE EEWRSVIDVH LHGTFFVSRA
AANYFKDQES GAYVNMTSTS GLIGNLGQAN YSAAKLGIAA LSKSIALDMA RFNVRSNCIA
PFAWSRMTSS IPAETPAEKE RVARLQKMEA GKIAPVAVFL ASDAAKDVNA QIFAVRANEI
MLMSQSRPVR SVHTGEGWTP ETVAEIAMPA MRGSFFKLDR SPDVINWDPI
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