| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3581 |
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| Symbol | |
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| ID | 4040430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3885468 |
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| End bp | 3886691 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978999 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_585722 |
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| Protein GI | 94312512 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.434034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG ATGGAATCGA CCAGCCGAAG GGCTTTGTCG ATGGCAACTG GAGCGCGGCC
GCCGGTACGG GGCGCGGCCG CACTTCGCGC TGGCCGGCCG TCGTGGCCGT GCTTGTGATC
GTTGTCGCCG GCTGGTTTGG CTGGAAGCAC TGGTTTGCGC CGAAGCCGGC CGCCAAGGGC
CCGGCCGTGA CCACGGTTGC CACGGCTATC GTCCAGCAGG GCGATGTGCC GCTGGAAGTG
AACGCCAACG GCAATGTGGT GGCGATGCAG ACCGTGGAGG TGCGCCCGCA GGTGTCGAGC
ACCGTTCGCA CGGTCCATAT CAAGGAAGGC CAGAGCGTCA AGCCGGGCGA CCTGCTGTTC
TCGCTCGATA CGCGCATGGA CGAGGCCAAT CTGGACAAGG CGCGCGCCCA GCTCATGCGC
GACCAGGCCG ATCTGTCCGA CGCACGCCGC ACGCTGACAC GTAGCCAGGA GCTGCTGCAG
CGCAACTTCA TCTCGCGCAG TGCCGTGGAT ACGGCACAGG CCAAGGTCGA CGGCTTCGAA
GCCACGATTC GCGCCGACCA GGCGGCCATC GAAGCGAGCC GCGTGGCCAT CAGCTACGGC
ACGATTCGAG CGACGATCGG CGGCCGGACC GGCGTCATCA ACGTCTTCCC GGGCTCGCTG
GTCACGCCGA CGACTGCGAC GCCGATGGTC ATCGTGGCGC AGATCGCGCC GATCACGGTC
ATGTTCACGC TGCCCGAACG GCAGCTTGCC GCCCTGCGCG AGGCACTGCG CAGCGGACCG
GTATCGGTGA CGGCGCTGCC TAACGACGGC AGCAAGCAGC CCGTGACCGG CAAGATCACA
TTCGTCGACA ACACCGTCGA TCCGCAGTAC GGCAGCATCC GCGTCAAGGC GATGTTTGGC
AACGAAGAGC ACCGCCTCTG GCCGGGCACC TACGCCAACG TCAACGCCAC GGTGCAGGTG
CTGAAGGATG CGCTGTCCGT GCCGCCACAG GCCATCGTGG CCGGCCCCGA GGGCCGTTTC
GTTTACACCG TGCAGGCCGA CAACAAGGTG GCGCGCGTGC CAGTGCAGGT CATCGCCACG
ACGGCTGCTG CCGCGGTGAT CGAAGGCGTG CAACCCGGCG CGCGCGTCGT GACCGAGGGC
GCGCAGAATC TGCGTCCGGG AAGCCTGGTG CGGGAAGCTG CCGCTCGCGG CGCTTCGGCC
CCGGCCGCCG CTACCAAGCA TTGA
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| Protein sequence | MKTDGIDQPK GFVDGNWSAA AGTGRGRTSR WPAVVAVLVI VVAGWFGWKH WFAPKPAAKG
PAVTTVATAI VQQGDVPLEV NANGNVVAMQ TVEVRPQVSS TVRTVHIKEG QSVKPGDLLF
SLDTRMDEAN LDKARAQLMR DQADLSDARR TLTRSQELLQ RNFISRSAVD TAQAKVDGFE
ATIRADQAAI EASRVAISYG TIRATIGGRT GVINVFPGSL VTPTTATPMV IVAQIAPITV
MFTLPERQLA ALREALRSGP VSVTALPNDG SKQPVTGKIT FVDNTVDPQY GSIRVKAMFG
NEEHRLWPGT YANVNATVQV LKDALSVPPQ AIVAGPEGRF VYTVQADNKV ARVPVQVIAT
TAAAAVIEGV QPGARVVTEG AQNLRPGSLV REAAARGASA PAAATKH
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