| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3529 |
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| Symbol | |
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| ID | 4040377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3821572 |
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| End bp | 3823752 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637978946 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_585670 |
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| Protein GI | 94312460 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCTGC TGTTATTCGC GGGCGCCGCG CAGGCCGTGC CCACGTTTCG AGAGGTTCGC
GCCAACTGGC GCAGCGCCGA TATCGTGGTG GTGGATCGCC ACGGCGAAAC CGTGGCCCGC
GTGCGTGACG ACTTCCGCGC GCGGCGCGGC GACTGGGTGA CGCTGACCGA TACATCGCCG
GCCTTGCGCA CCGCCATCGT GCTATCCGAG GACAAGCGCT TCTACGCGCA TAGCGGCGTC
GACTGGCAGG GCGTGGCGGC TGCCGCATGG GCCAATCTGT GGAACACCCG CACACGTGGC
GCTTCGACGC TGACGATGCA GCTCGCCGGG TTGCTCGACG AGGATTTGCG CGCGGGCCGT
GGTCGCAGCA TCGGGCAGAA AGTCGAGCAG GCGGTCAGCG CGGCGTCACT CGAGCGTGGC
TGGAGCAAGG ACCAGATCCT CGAGGCATAC CTGAATCTGG TGCCGTTCCG TGGCGAACTG
GTGGGGCTCT CCGCGATGTC GCAGACGCTG TTCGGCAAGG TGCCGAGCGG GCTCGACGCG
CGTGAGTCGG CAGTGGCCGT CGCGCTCGTG CGCGCGCCCA ATGCCTCGGC CGCGCAGGTG
TCCAAGCGTG CGTGCGGCAT TCTGCGCGAC ATGGGCCAGC CGCGCGAATG CGAGGGGCTC
GACGGTTTCA CCGCGCTGGT GCTGGTGAAG TCAGCCAGTG CGCAGACCGG CCCGCAGGCC
CGCAACGCCA ATCTCGCGTC GCATCTGGCT CGTGCCGTTA TCGCGCAGGC GCGAGAGTCC
GGCAAGCCGG TGCCACCGCG CATCACTTCC ACCCTCGATG CCGGGCTGCA ACGCGTGGCA
GTGACCAGCC TCGATCGCCA TCTGCGCGAG CTGGCGGGGC GCAATGTCGA GGACGGCGCC
GTGGTGGTGA TCGACAACGC CAGCGGTGAC GTGCTGGCCT ATGTCGGCTC TTCAGGCATC
CTGTCCGCGG CGTCACAGGT CGATCACGCG GCGGCGCTGC GGCAGGCCGG TTCGACGTTG
AAGCCATTCC TCTATGAGCA GGCCATCGAG GAACGCAGGC TGACCGCGGC ATCGCTGCTT
GACGATCGTC CGGTGAATCT TCCCACTGGC GGTGGCCTCT ACATTCCGCA GAACTATGAC
CATCGCTACG CAGGCTGGGT CAGTCTGCGC GCCGCGCTGG GTTCGTCACT GAACGTGCCG
GCGGTGCGCA CGCTGGTGAT GGTGACGCCG CACCGCTTTC ATCAACGGCT GGTGGCGCTC
GGCCTGCCGC TGACGCAATC AGGCGATTAC TACGGCTATA GCCTTGCGTT GGGCAGTGCG
GATGTGTCGC TGCTGTCGCT GACCAATGCC TATCGCAGCT TCGCCAACCA GGGCGCGTAT
GCGCCATCGC GGATGACGCT GAATGCCGCC GTGCCGTCGA AGCAGAACGT GATGATGCCG
GCGGCGACGT TCGTGATCGG GGATGTGCTG TCTGATCGCC ACGCGCGGGC GCGTACGTTC
GGGCTCGACA GTCCGCTGAC CACGCGTTTC TGGACGGCAG TGAAAACCGG CACGAGCAAG
GACATGCGCG ACAACTGGTG CGTCGGCTGG TCGGAGCGCT ACACAGTGGG CGTGTGGGTC
GGCAATGCCA GCGGCGCGAG CATGCACGAC GTATCGGGAG TGTCTGGCGC GGCGCCCGTA
TGGCACGAGG TCATGGAAGC GCTGCATCAG CGCACGCCGA GCCGCGCGCC GGCGATGCCA
TCAGGCGTCG AACGTGTGGC ATTGACGTTC GACGACGAAC TCGAGCCAGC ACGGCAGGAG
GTATTCCTGA GCGGCACCGG GATGCGGCGC GTCAGTGTGG GCACGACGGA GCAGGGCAAC
ACGATGCCGG CTATCGCCAG CCCGGCCGAC GGCACGATCT TCGCACTCGA TCCCGATATT
CCTCCGGCCG CGCAGCGGAT CTGGTTTCAT GCCGATGGGC TGACGGGTCA GACCGCGCGC
GCGGTGAGCT GGCGCATGGA CGGCAAGCCG CTCGGCAAGG GCGGGCAGGT TGCCTGGTTG
CCATGGCCGG GCCGGCATCG CGTGCAACTG GTCGATGCGG CGGGGAAGGT AGTGCACGAG
ATCGGCATCG AGGTGCGCGG CGCGGGCGTT CGTGAGACGG CGGCGCCACG GAAGACGCCT
GCGGGGCCGG TCCGGCAATA G
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| Protein sequence | MALLLFAGAA QAVPTFREVR ANWRSADIVV VDRHGETVAR VRDDFRARRG DWVTLTDTSP
ALRTAIVLSE DKRFYAHSGV DWQGVAAAAW ANLWNTRTRG ASTLTMQLAG LLDEDLRAGR
GRSIGQKVEQ AVSAASLERG WSKDQILEAY LNLVPFRGEL VGLSAMSQTL FGKVPSGLDA
RESAVAVALV RAPNASAAQV SKRACGILRD MGQPRECEGL DGFTALVLVK SASAQTGPQA
RNANLASHLA RAVIAQARES GKPVPPRITS TLDAGLQRVA VTSLDRHLRE LAGRNVEDGA
VVVIDNASGD VLAYVGSSGI LSAASQVDHA AALRQAGSTL KPFLYEQAIE ERRLTAASLL
DDRPVNLPTG GGLYIPQNYD HRYAGWVSLR AALGSSLNVP AVRTLVMVTP HRFHQRLVAL
GLPLTQSGDY YGYSLALGSA DVSLLSLTNA YRSFANQGAY APSRMTLNAA VPSKQNVMMP
AATFVIGDVL SDRHARARTF GLDSPLTTRF WTAVKTGTSK DMRDNWCVGW SERYTVGVWV
GNASGASMHD VSGVSGAAPV WHEVMEALHQ RTPSRAPAMP SGVERVALTF DDELEPARQE
VFLSGTGMRR VSVGTTEQGN TMPAIASPAD GTIFALDPDI PPAAQRIWFH ADGLTGQTAR
AVSWRMDGKP LGKGGQVAWL PWPGRHRVQL VDAAGKVVHE IGIEVRGAGV RETAAPRKTP
AGPVRQ
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