| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3159 |
|---|
| Symbol | |
|---|
| ID | 4039988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3424124 |
|---|
| End bp | 3425317 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637978559 |
|---|
| Product | peptidase M20D, amidohydrolase |
|---|
| Protein accession | YP_585300 |
|---|
| Protein GI | 94312090 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA TCCCCGAAAT CCTGCAGGCG CAAGCCGAAA TCCGAACCCT CCGACGCGAC
ATCCACGCCC ATCCCGAACT CTGCTTCCAG GAGCAGCGCA CGTCCGATCT GGTGGCAAAG
AGCCTCGAGT CCTGGGGGAT CGAAGTCCAT CGCGGACTGG GCACGACGGG CCTGGTCGGC
GTGATTCGCA ACGGCAATAG CGGCCGCACC ATCGGCCTGC GCGCGGACAT GGATGCGCTG
CCGCTGCAGG AGGCCAACAC GTTCGGCCAT CGCTCCCAAC ACGAAGGCAA GATGCACGCG
TGCGGCCACG ACGGCCATAC CGCGATGCTG CTGGGCGCGG CCCGCCACCT GGCTGAACAT
CGCAACTTCG ACGGCACGGT TCACGTGATT TTCCAGCCCG CCGAGGAAGG CGGCGGCGGC
GCGCGCGAGA TGATCAAGGA CGGACTGTTC GACCGCTTCC CGTGTGATGC CGTATTCGGC
ATGCACAACT GGCCCGGCAT GCCAGTAGGC ACGTTCGGCA CCACAGCGGG CCCGCTGATG
GCATCGAGCA ACGAATTCAA GATCACGGTG CGTGGTAAGG GCGCGCACGC GGCCATGCCG
AACAACGGCT GCGACCCGGT GTTCACGGGC GCGCAGATCG TGTCCGCGCT GCAGGGCATC
ATCACGCGCA ACAAGCGCCC GATCGACGCT GCGGTGATCT CCGTCACGCA GTTCCACGCA
GGCGACGCCA CCAATATCGT GCCGGACTCG GCATGGATCG GCGGCACCGT GAGAACGTTC
ACGATCCCGG TGCTTGACCT GATCGAGCGC CGCATGGAGG AAGTCGCGCG GGCCGTGGCA
CAGGCGTTCG ATTGCACGAT AGAGTTCGAA TTCAGCCGCA ACTATCCGCC GACCATCAAC
AGTGCAGCCG AAGCCGAGTT CGCCGTGGGG GTGGCCACCG AGCTGGTGGG CGCATCGAAT
GTCGATGGCA GCGTCGAGCC GACCATGGGC GCCGAGGATT TCTCGTTCAT GCTGCAGGCA
AAGCCCGGCT GCTACCTGTT TATCGGCAAT GGCGAAGGAT CGCACCGCGA AGCTGGCCAC
GGCATGGGCC CGTGCATGTT GCACAACCCG AGCTATGACT TCAACGATGA ACTGCTGCCA
ATCGGCTCGT CGTTCTTCGT GAAGCTGGTG GAGAAGTGGC TGGCGCCGGC CTGA
|
|---|
| Protein sequence | MKLIPEILQA QAEIRTLRRD IHAHPELCFQ EQRTSDLVAK SLESWGIEVH RGLGTTGLVG
VIRNGNSGRT IGLRADMDAL PLQEANTFGH RSQHEGKMHA CGHDGHTAML LGAARHLAEH
RNFDGTVHVI FQPAEEGGGG AREMIKDGLF DRFPCDAVFG MHNWPGMPVG TFGTTAGPLM
ASSNEFKITV RGKGAHAAMP NNGCDPVFTG AQIVSALQGI ITRNKRPIDA AVISVTQFHA
GDATNIVPDS AWIGGTVRTF TIPVLDLIER RMEEVARAVA QAFDCTIEFE FSRNYPPTIN
SAAEAEFAVG VATELVGASN VDGSVEPTMG AEDFSFMLQA KPGCYLFIGN GEGSHREAGH
GMGPCMLHNP SYDFNDELLP IGSSFFVKLV EKWLAPA
|
|---|
| |