| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3114 |
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| Symbol | |
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| ID | 4039943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3373119 |
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| End bp | 3375149 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978514 |
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| Product | oligopeptide transporter OPT |
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| Protein accession | YP_585255 |
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| Protein GI | 94312045 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTG TCGATCGTAT CGATGACGCT GTTTCTCTGC CCGAACTGAC GCTGCGGGGC
ATCATCCTCG GCGCCCTGAT CACGGTGGTG TTCACCGCCT CCAATATCTA CCTCGGCCTC
AAGGTCGGCC TGACGTTTTC CTCGGCGATC CCTGCTGCCG TGATCTCGAT GGCCGTGCTG
CGACTGTTTC CGGGCGCGAA CATCCTCGAG AACAACATGG TGCAGACGCA GGCGTCCGCT
GCTGGCACGC TGTCGTCGAT CATCTTCATC CTGCCGGGTC TGGTCATGCT GGGACACTGG
CAGGGGTTCC CGTTCTGGCA GACGCTGGCG ATCTGCGCAG CGGGTGGCAT GCTCGGGGTG
ATCTTTAGCA TCCCGCTGCG CCACGCGATG GTGGTGCACA GCGATCTGCC GTATCCGGAA
GGGGTGGCCG CCGCCGAGAT CCTGCGAGTG GGGAGCGCGA GCCAGGATAA GGGCAACGGA
AAACAGGAGA CCGGGCTTGG TGACCTCGTT GCAGGTGGCG TTGCTGCGGG CCTGTTCAGC
ATTGCCGCAG GTGGCTTCCG GGTTCTGGCA GAAGGGGCCA ATGCCTGGCT GGCCGTTGGC
GCATCCGTGG TGCGCCTCTC GATGGGTTTC TCACTCGCGC TGGTGGGCGC CGGCTATCTG
GTCGGCATCG TCGGCGGGTT GGCTATGTTG CTGGGCCTGT TCCTGACCTG GGGCATCGCG
GTGCCGTGGC TGACTGCTAT CACACCGATG CCGGCGGGGG CCACGCTGTC CAGCTTCGGT
ACCGCAGTGT GGAGCACGCA AGCGCGCTTC ATCGGCGCGG GCACGATCGG TATCGCGGCG
ATCTGGACGC TCGGCACGCT GTTCAAGCCG ATGGTGGAAG GCGTACGTGC ATCGATGGGT
GCCCTCCGTG CCGGCGCGCC GGGAGAGGGT GGCGCGGTGC CGCGCACGCA ACGCGACTTG
CCGATGGCCT GGATCGGCGT CCTCACGCTG GTCCTGCTGG TGGTGCTGGC AGTGACGTTT
GGATACTTCC TGGCCCCGGC ACCGCTCGAT ACCGGTGCCA CCTGGCGTCT GGTTGGCTGT
GCCGTGCTGT TCGCCTTCGT GTTCGGCTTC CTGGTGGCTG CCGCATGTGG CTATATGGCT
GGTCTGGTGG GGTCGTCAGC CAGCCCGATC TCGGGCATCG GCATCATCGC TGTGATCCTG
GTGTCGCTGC TGATTCTTGG CATCGGCACG CTGGACGGCC TGCTCGACAC GTCCGAGGGC
GGCAAATACG CGATTGCGCT GGCGATCTTC ACGACCTCGG CCGTCGTGGC GGTGGCCTCG
ATCTCGAATG ACAACCTGCA GGATCTCAAG ACTGGCTGGC TGGTTGGCGC CACGCCGTGG
CGCCAACAGG TGGCGCTGCT GATCGGCTGC GCGGTGGGTG CTGCCGTGAT TCCGCCGGTG
CTCGAACTGC TCTATCACGC GTACGGCTTT GCCGGCGCCT TGCCTCGGGC CGACATGGAC
CCGAATTCGG CGCTGGCTGC GCCGCAGGCC ACGTTGATGA CCGCGATCGC TACGGGCATC
TTCACGCACA AGCTCAACTG GACAATGATC CTGATTGGCG TGGCGCTGGG TGTTGTGCTG
ATCGCGATTG ACGAAGTGCT GCGCCATCGC GGTGGCGTGG CGCGGCTGCC CGTACTGGCA
GTGGGCATCG GCATCTACCT GCCGCCGACG ATCAGTTCAG CGCTGGTGGT GGGCGCGGTG
TTGTCGTGGT GGTTGCTGCG CACGGAGCGC AAGCGCGCCG AGGCGCGTGG CGACGATGTG
CCCACGGTGC TGGCCCATGC TGAGCGGCGC GGGACGCTGC TTGCTTCGGG CCTGATCGTG
GGTGAAAGCC TGGTCGGCGT TGCGCTGGCC GCGGTGATCG GCCTCTCGGG CAAGGAGGCG
CCGCTGGCAC TGGTGGGCGA GGGGTTTGGC ACTACGGCGC AGTGGCTGGG ACTGGCCGTG
TTCGTGCTGG TCTGCGTGGG ATTCTGCCGT CGGGTGCTGG CTGCACGTTA G
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| Protein sequence | MQRVDRIDDA VSLPELTLRG IILGALITVV FTASNIYLGL KVGLTFSSAI PAAVISMAVL
RLFPGANILE NNMVQTQASA AGTLSSIIFI LPGLVMLGHW QGFPFWQTLA ICAAGGMLGV
IFSIPLRHAM VVHSDLPYPE GVAAAEILRV GSASQDKGNG KQETGLGDLV AGGVAAGLFS
IAAGGFRVLA EGANAWLAVG ASVVRLSMGF SLALVGAGYL VGIVGGLAML LGLFLTWGIA
VPWLTAITPM PAGATLSSFG TAVWSTQARF IGAGTIGIAA IWTLGTLFKP MVEGVRASMG
ALRAGAPGEG GAVPRTQRDL PMAWIGVLTL VLLVVLAVTF GYFLAPAPLD TGATWRLVGC
AVLFAFVFGF LVAAACGYMA GLVGSSASPI SGIGIIAVIL VSLLILGIGT LDGLLDTSEG
GKYAIALAIF TTSAVVAVAS ISNDNLQDLK TGWLVGATPW RQQVALLIGC AVGAAVIPPV
LELLYHAYGF AGALPRADMD PNSALAAPQA TLMTAIATGI FTHKLNWTMI LIGVALGVVL
IAIDEVLRHR GGVARLPVLA VGIGIYLPPT ISSALVVGAV LSWWLLRTER KRAEARGDDV
PTVLAHAERR GTLLASGLIV GESLVGVALA AVIGLSGKEA PLALVGEGFG TTAQWLGLAV
FVLVCVGFCR RVLAAR
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