9 homologs were found in PanDaTox collection
for query gene Rmet_3008 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007953  Bxe_C1175  transposition protein TniQ  93.09 
 
 		 405 aa  766    Burkholderia xenovorans LB400  Bacteria  normal  0.751536  normal  1 
 
 
-
 
NC_007973  Rmet_3008  hypothetical protein  100 
 
 		 405 aa  822    Cupriavidus metallidurans CH34  Bacteria  normal  1  hitchhiker  0.00754024 
 
 
-
 
NC_007974  Rmet_4043  transposon related protein TniQ (Tn6048)  100 
 
 		 405 aa  822    Cupriavidus metallidurans CH34  Bacteria  normal  0.705627  normal  0.297499 
 
 
-
 
NC_007974  Rmet_4974  transposon related protein TniQ (Tn6048)  100 
 
 		 405 aa  822    Cupriavidus metallidurans CH34  Bacteria  normal  0.39202  normal  0.593439 
 
 
-
 
NC_013235  Namu_3577  TniQ family protein  42.96 
 
 		 407 aa  270  4e-71  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0706835  hitchhiker  0.00685617 
 
 
-
 
NC_007517  Gmet_3049  hypothetical protein  28.14 
 
 		 397 aa  47  0.0006  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.356075 
 
 
-
 
NC_009430  Rsph17025_4234  hypothetical protein  27.78 
 
 		 348 aa  46.2  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.877652 
 
 
-
 
NC_008703  Mkms_5595  hypothetical protein  28.31 
 
 		 250 aa  43.5  0.007  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009339  Mflv_5413  hypothetical protein  28.31 
 
 		 250 aa  43.5  0.007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.526467  normal  1 
 
 
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