Gene Rmet_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2950 
Symbol 
ID4039778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3207687 
End bp3208823 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content63% 
IMG OID637978350 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_585092 
Protein GI94311882 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.37884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG ATACGAGCCA GCCGCGCGCG ACCATTCTCT ACGTCGATGA CGAGGAGATG 
GCGTGCAAGT ATTTCGCGCG CGCGGCCGGC AGCGAACACG AAGTACTTTC CGCCACCGGC
GCGGATGAGG CGATAGCCAT CCTGCAGGAG CATCAAGCGA AGATCTCGGT GCTGGTCACC
GACTATCGGA TGCCGGGCCG CGATGGTGGC GACCTGCTGC GACAGGTGGC GCTGGAGTAT
CCGCAGATCG TGCGGATACT GGTCACGGCC TATGCCGACA AGGACATGCT GCTCGAGACC
GTCAATAGCG GCGAAGTCTT CAAGATTCTC GAGAAGCCGA TCACCGTGAC CGATGTGCGC
GAGGTGCTGC GCCTGGCCGG AGAGCGTTAT CGCGAACGCG CGGTGCGTCA GCAAAGGCTG
ATGGCGATCG ACGAGACGCT GGCCTTTCTG GCCCATGAAC TGAATACGCC GCTGGCGGCG
ATTGCCAACT TCGCACGCGG GATCGAGGCG CGCGTGGCTG GCGAGTACAA CCAGCAGCGT
AATGCCGAGA TCGGCCGCGC GGCCGGTGCC ATGCATGACA ACGCCCAGTA CTGCCTTGCA
GTGCTGTCGT CGTTCCTGCA GTCCGTGCGC AGCAGCGCGG GCGGTGCCAA GCCGAAGCCG
GGTCCGGGCA ATGACGTCAG TGCGGGGGCA TTGGTGGCAT CCCTGCTGGA TAGCTATCCG
TTTGCCGATA ACCAACGTAA CTGGGTGCAA GTCGAGTTGC ACGACGATTT TCCCGTGCCG
ACGCTGCCGA ACTGCGTGGC GCTGGTGCTG TCGTCGGTGA TGAGCAATGC GCTGCGCGCG
CTGGCCGATG TGGACAACCC GTCGCTGCGC TTTGTCGTGG TGGCTGGAGA TCGGCCGGAA
ATCCGCATCG CGGACAACGG GCCCGGCATT CCGCCGGAGG TGATGGATCG TCTGCTCGTC
GACCCCGTCA CCACGCACGC CTCGGCGGGC GGCAGCGGGA TGGGCATGAT CTTCTGTAAC
CGCGTCATGC AATCTTTTGG TGGCGGCATC CGGATCGCTT CGGCTTCGGG CGCAGGCACC
ACCGTAACCC TCGATTTCCC CAATATGAAG AATCGTATGA ACAGGAGTGA TCGATGA
 
Protein sequence
MTTDTSQPRA TILYVDDEEM ACKYFARAAG SEHEVLSATG ADEAIAILQE HQAKISVLVT 
DYRMPGRDGG DLLRQVALEY PQIVRILVTA YADKDMLLET VNSGEVFKIL EKPITVTDVR
EVLRLAGERY RERAVRQQRL MAIDETLAFL AHELNTPLAA IANFARGIEA RVAGEYNQQR
NAEIGRAAGA MHDNAQYCLA VLSSFLQSVR SSAGGAKPKP GPGNDVSAGA LVASLLDSYP
FADNQRNWVQ VELHDDFPVP TLPNCVALVL SSVMSNALRA LADVDNPSLR FVVVAGDRPE
IRIADNGPGI PPEVMDRLLV DPVTTHASAG GSGMGMIFCN RVMQSFGGGI RIASASGAGT
TVTLDFPNMK NRMNRSDR