8 homologs were found in PanDaTox collection
for query gene Rmet_2660 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_2660  hypothetical protein  100 
 
 
269 aa  529  1e-149  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4355  hypothetical protein  37.5 
 
 
289 aa  111  1.0000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.778034  n/a   
 
 
-
 
NC_007348  Reut_B5480  hypothetical protein  38.06 
 
 
285 aa  106  4e-22  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5774  hypothetical protein  44.83 
 
 
289 aa  94.4  2e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4342  hypothetical protein  36.59 
 
 
141 aa  83.6  0.000000000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.865392  n/a   
 
 
-
 
NC_007974  Rmet_5661  hypothetical protein  36.44 
 
 
121 aa  82.4  0.000000000000008  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.345821 
 
 
-
 
NC_010681  Bphyt_1599  hypothetical protein  40.74 
 
 
214 aa  75.5  0.0000000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372929  normal 
 
 
-
 
NC_011673  PHATRDRAFT_44995  predicted protein  40.3 
 
 
1217 aa  42.4  0.007  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  decreased coverage  0.00833272  n/a   
 
 
-
 
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