| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2561 |
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| Symbol | |
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| ID | 4039384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2784562 |
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| End bp | 2785938 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637977960 |
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| Product | phage integrase |
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| Protein accession | YP_584707 |
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| Protein GI | 94311497 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.190993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA CTCTCGGTGT TCTGCGCGTG ACTCTCAAAC ATGCCTTCCT CCGTGGTGGT
GTCATCTACT ACCAGCGAGC AATCCCGAAA GACCTACAGG ACCGCTATTC CGCCAAGCTG
GTGAAGGCCA GCCTTGAGAC TGGTGATGTG CTGGTAGCAA AGCGGAAGAT CGAGCAACTA
AACCGCGAGC TTGAAGCGGA GTGGGCGATG ATGCGCGGCC ACCCCGAGGC GACACCTAAG
ACCATCCAAG GGCAGGCCGT TGAGTTGCTG CGCAAGTGGG GCCTCACGGC AACCCCAACG
GATGACGATG AGGACGCTAT AGACCTCTTC CGCGAAAGCC TGGACGAGAA GCGCCAGCGA
TATGCGGAGG GCGATGACGA GGTGTATAGC GATGCGGACG GTAGCGAGTA CCTGAGCCCC
GTCGAAATCA AAGCAGCGCA GATCATCGCG GGCACCATCA AGCCTGTCCT CAGTGAGGCC
CTTGAGTTGT ATCTGAAGGT GCATCCGAAG CGGAACGACA AACGCTTTGA AGACGGTGCA
AGGCTTGTCT TTAAGACACT CACGGATGCC ATAGGCGACA AGCCGATTGA AGACCTCTCA
CGGAGTGATG CGCACAAGTA CGTTGCTGCT GAGATTGCCC GTGGGGTGAA GACTGGCACT
GTCAATCGCT ACATGAATAC GATCCGCGCC ATTATCGGCA CGTGGTTGCG CGAGAAGGAA
ATTGCCAAGG CCAACCCATT CACCCGGATT CCGATCCCAG AGAATGGCAA GGATGCAAAG
AAGCGGGAGC CCTTCACCGA GCCAGAACTC AAAACACTCT TCGCTGCGTG CAAGACCAAG
GATGATGATG TCCGGTGGTT GACTGCCATC CTAGGGGACA CGGGAGCACG CCTAGCAGAG
ATAGCAGGGC TGGCCTTGGA TGACATCAAC CTTGATGCTG AGATTCCCCA CGTTGTCATT
CAGCCGCACC CTTGGCGGTC CCTCAAGAAT GACGTGAGTG CGCGTACAGT GCCGCTCTTG
GGTCATGCCT TATGGGCCGC TCAGCGAATC AAAGAGACTG CAAGGAAGGG CCAGCGTTTC
GCCTTCCCCC GGTACACCTC AGCGGACAAG GCGGGCACCG CCGTAGAGAC AAAGGCCACT
CACGCATCCA ACACTATTGC GAAGTGGATA CGGACGCTGA AGGTTGATGG CGTGAAGATG
AACCACACCG CGCATGAGCT ACGCCACACG ATGGCCGACC GTCTGCGGGA GGTAGGCTGT
CCTCCCGAGA TTCGCCTTGC AATAGGTGGA TGGGCGATTG ACGGTATTGG GGCCACCTAT
GGCAAAGGCT ATACGCTTCG CGTCATGTCC GAGTGGCTCG GGAAAGTGAC CATCTGA
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| Protein sequence | MKLTLGVLRV TLKHAFLRGG VIYYQRAIPK DLQDRYSAKL VKASLETGDV LVAKRKIEQL
NRELEAEWAM MRGHPEATPK TIQGQAVELL RKWGLTATPT DDDEDAIDLF RESLDEKRQR
YAEGDDEVYS DADGSEYLSP VEIKAAQIIA GTIKPVLSEA LELYLKVHPK RNDKRFEDGA
RLVFKTLTDA IGDKPIEDLS RSDAHKYVAA EIARGVKTGT VNRYMNTIRA IIGTWLREKE
IAKANPFTRI PIPENGKDAK KREPFTEPEL KTLFAACKTK DDDVRWLTAI LGDTGARLAE
IAGLALDDIN LDAEIPHVVI QPHPWRSLKN DVSARTVPLL GHALWAAQRI KETARKGQRF
AFPRYTSADK AGTAVETKAT HASNTIAKWI RTLKVDGVKM NHTAHELRHT MADRLREVGC
PPEIRLAIGG WAIDGIGATY GKGYTLRVMS EWLGKVTI
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