Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2262 |
Symbol | |
ID | 4039080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2481918 |
End bp | 2482631 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637977657 |
Product | diguanylate cyclase |
Protein accession | YP_584410 |
Protein GI | 94311200 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0475991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.424115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAGC CCGATCTGTT CGAATCGGAG AACAGCGTTC TGGCCCACGC CAGATCCGTG TTCTGCGATG TCGACGCGGG CGAGGAAGCC TATCGTCACA CCCTTGGCCA GCTCATCAGC TACTACGAGC GGCTGATGCG CGAGACGCGC CGCTTGATCC GGCGCAGCGA CCGTGAAGAG CTGGAAATGA ACCGTCTCAA CCACCGGTTG CAGGAACTGG CCCAGGAACT CGAATACCGC GCCACGCACG ACACACTGAC CGGCGCGCTC AACCGCGGCG CCGTCATCGA CCGCGCCACA GCGGCGCTGG CGCGCGGCAG CCTCGCGCTG ATCGTGATCG ACATCGACCA CTTCAAGCGC CTGAACGACG ACTTCGGCCA CCCCGTGGGC GATGCGGTGA TCTGCGGCGT CACGGCCTGC CTGAAGGACA CGGTCCGCAT GGAAGGCGTG ATCGGACGCA TGGGCGGCGA AGAGTTCGCG GCGCTGCTGC CCGACTTCAC GATCGACGCC GCCGCCACGT TGGCCGACCA GATGCGCCAG GCCATCGCCG GACATCGTTT CCCTGCCCCC GTCAACCGCG AGGTCACCGC CAGCTTCGGC GTAAGCTGGT CACCGCAGGG CCGCCCGTTC GAGCACGCCT ACGGCCGCGC GGACGAGGCG TTGTATGAAG CCAAGCGAGG CGGGCGGAAT CGGGTGACGC AGGCGCGGGA GTGA
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Protein sequence | MPEPDLFESE NSVLAHARSV FCDVDAGEEA YRHTLGQLIS YYERLMRETR RLIRRSDREE LEMNRLNHRL QELAQELEYR ATHDTLTGAL NRGAVIDRAT AALARGSLAL IVIDIDHFKR LNDDFGHPVG DAVICGVTAC LKDTVRMEGV IGRMGGEEFA ALLPDFTIDA AATLADQMRQ AIAGHRFPAP VNREVTASFG VSWSPQGRPF EHAYGRADEA LYEAKRGGRN RVTQARE
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