| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2262 |
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| Symbol | |
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| ID | 4039080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2481918 |
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| End bp | 2482631 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977657 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_584410 |
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| Protein GI | 94311200 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0475991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.424115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC CCGATCTGTT CGAATCGGAG AACAGCGTTC TGGCCCACGC CAGATCCGTG
TTCTGCGATG TCGACGCGGG CGAGGAAGCC TATCGTCACA CCCTTGGCCA GCTCATCAGC
TACTACGAGC GGCTGATGCG CGAGACGCGC CGCTTGATCC GGCGCAGCGA CCGTGAAGAG
CTGGAAATGA ACCGTCTCAA CCACCGGTTG CAGGAACTGG CCCAGGAACT CGAATACCGC
GCCACGCACG ACACACTGAC CGGCGCGCTC AACCGCGGCG CCGTCATCGA CCGCGCCACA
GCGGCGCTGG CGCGCGGCAG CCTCGCGCTG ATCGTGATCG ACATCGACCA CTTCAAGCGC
CTGAACGACG ACTTCGGCCA CCCCGTGGGC GATGCGGTGA TCTGCGGCGT CACGGCCTGC
CTGAAGGACA CGGTCCGCAT GGAAGGCGTG ATCGGACGCA TGGGCGGCGA AGAGTTCGCG
GCGCTGCTGC CCGACTTCAC GATCGACGCC GCCGCCACGT TGGCCGACCA GATGCGCCAG
GCCATCGCCG GACATCGTTT CCCTGCCCCC GTCAACCGCG AGGTCACCGC CAGCTTCGGC
GTAAGCTGGT CACCGCAGGG CCGCCCGTTC GAGCACGCCT ACGGCCGCGC GGACGAGGCG
TTGTATGAAG CCAAGCGAGG CGGGCGGAAT CGGGTGACGC AGGCGCGGGA GTGA
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| Protein sequence | MPEPDLFESE NSVLAHARSV FCDVDAGEEA YRHTLGQLIS YYERLMRETR RLIRRSDREE
LEMNRLNHRL QELAQELEYR ATHDTLTGAL NRGAVIDRAT AALARGSLAL IVIDIDHFKR
LNDDFGHPVG DAVICGVTAC LKDTVRMEGV IGRMGGEEFA ALLPDFTIDA AATLADQMRQ
AIAGHRFPAP VNREVTASFG VSWSPQGRPF EHAYGRADEA LYEAKRGGRN RVTQARE
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