Gene Rmet_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2262 
Symbol 
ID4039080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2481918 
End bp2482631 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID637977657 
Productdiguanylate cyclase 
Protein accessionYP_584410 
Protein GI94311200 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0475991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.424115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC CCGATCTGTT CGAATCGGAG AACAGCGTTC TGGCCCACGC CAGATCCGTG 
TTCTGCGATG TCGACGCGGG CGAGGAAGCC TATCGTCACA CCCTTGGCCA GCTCATCAGC
TACTACGAGC GGCTGATGCG CGAGACGCGC CGCTTGATCC GGCGCAGCGA CCGTGAAGAG
CTGGAAATGA ACCGTCTCAA CCACCGGTTG CAGGAACTGG CCCAGGAACT CGAATACCGC
GCCACGCACG ACACACTGAC CGGCGCGCTC AACCGCGGCG CCGTCATCGA CCGCGCCACA
GCGGCGCTGG CGCGCGGCAG CCTCGCGCTG ATCGTGATCG ACATCGACCA CTTCAAGCGC
CTGAACGACG ACTTCGGCCA CCCCGTGGGC GATGCGGTGA TCTGCGGCGT CACGGCCTGC
CTGAAGGACA CGGTCCGCAT GGAAGGCGTG ATCGGACGCA TGGGCGGCGA AGAGTTCGCG
GCGCTGCTGC CCGACTTCAC GATCGACGCC GCCGCCACGT TGGCCGACCA GATGCGCCAG
GCCATCGCCG GACATCGTTT CCCTGCCCCC GTCAACCGCG AGGTCACCGC CAGCTTCGGC
GTAAGCTGGT CACCGCAGGG CCGCCCGTTC GAGCACGCCT ACGGCCGCGC GGACGAGGCG
TTGTATGAAG CCAAGCGAGG CGGGCGGAAT CGGGTGACGC AGGCGCGGGA GTGA
 
Protein sequence
MPEPDLFESE NSVLAHARSV FCDVDAGEEA YRHTLGQLIS YYERLMRETR RLIRRSDREE 
LEMNRLNHRL QELAQELEYR ATHDTLTGAL NRGAVIDRAT AALARGSLAL IVIDIDHFKR
LNDDFGHPVG DAVICGVTAC LKDTVRMEGV IGRMGGEEFA ALLPDFTIDA AATLADQMRQ
AIAGHRFPAP VNREVTASFG VSWSPQGRPF EHAYGRADEA LYEAKRGGRN RVTQARE