| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2245 |
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| Symbol | |
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| ID | 4039063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2458956 |
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| End bp | 2460236 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637977640 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_584393 |
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| Protein GI | 94311183 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.310334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGC CCGGCCGCCC CCCCGCCCGC GACGACGCCG TGCCACAGCG CCCGACGCTG
TACCGCGCGC TGCGGCGCAT CCACCTTGGC GTGGCGCTGA TCGCCGTGTT CACGGTCGGC
ATCTCGCTGA CCGCGCTCGG GCTGACCGCG CTGCGCGTCT ATGCGGATCA CAACCTCCGG
CTGGTCGCGC GCTCGATCGC CTATACGGTG GAAGCGCCGG TCGTGTTCGG CGACGCCGCC
GCCGCGGCCG ATGCGCTTTC CGTGATCGCC GCATCCGAGG ACGTGACGCG GGTCATCGTG
TACGACCGCG ACCACCAGCC GATGACCGTG TGGCAGCGCC CCGGTCACGA GCAATTCCCC
GCGCTGCGCC GGGTGGCCGG CGACCTGCTG ATATCGGGCG CCGTCGAGCA GCCAATCCTT
CACGAAGCCC AGCAGGTAGG CAGCGTGCGT GTGGCAGGCG ATCCGGTGGC GCTCCTGCAC
TTCCTGCTGC AAGGCACGCT GGGCCTGGGA GCCTGTCTGC TGTTGACGGC GCTGGTGGCG
CACTACATGT CCCGCCGAAT GCTCAGGGAT GTCGTCAATC CCCTGCGCAA CCTGATGCGC
GTGGCCCACG CGGTGCGTTC CGAACGCGCG TTTGGACAGC GAATGCCACC GGCGCGGATC
GAGGAACTGA ATGCGCTGTC CGAAGACTTC AACGTCCTGC TGGACGAACT CGAGGCCTGG
CAAAACCAGC TTCAGCACGA GAACCGTTCG CTGGCGCACC GCGCCAGCCA TGACAGCCTG
ACAGGCTTGC TCAACCGCGC CGCCTTCACT GAAGCGCTCG ATCTCGCCGT GCGTACTGCG
GCGGCGCGCA ATCAATATGC CGCCGTGCTC TATCTCGACA GCGACGACTT CAAGGGTATC
AACGACCGCT ATGGCCACGC GGCGGGCGAC GCCGTGCTCG TCGCCGTCGG TCAACGCCTG
CGCGGCTGCC TGCGCGAAGG CGACAGCGTG GCGCGACTGG GCGGCGACGA GTTCGCCGTG
CTGGTCAACG CCCTCCGCGC GCCCGAGGAC GCGGTTCGCA TCGCCGAGCA CATCCTCAAC
GCCATGGCCA CCCCTGTGTG TCTGGCCGAT GGCACCACCA TCTTCGCGCC GCTCAGCATC
GGCCTGGCGG TCTACCCGCT GCATGCCCGC AACGGCACGG CGCTGCTCCA TTCCGCCGAT
GCCGCGATGT ACGGGGCCAA GCGCCAGTCC GGCGCCACCT GGCACAGCGC GGAGTCCGCG
CCACCGGAGC CACATCTCTA G
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| Protein sequence | MNWPGRPPAR DDAVPQRPTL YRALRRIHLG VALIAVFTVG ISLTALGLTA LRVYADHNLR
LVARSIAYTV EAPVVFGDAA AAADALSVIA ASEDVTRVIV YDRDHQPMTV WQRPGHEQFP
ALRRVAGDLL ISGAVEQPIL HEAQQVGSVR VAGDPVALLH FLLQGTLGLG ACLLLTALVA
HYMSRRMLRD VVNPLRNLMR VAHAVRSERA FGQRMPPARI EELNALSEDF NVLLDELEAW
QNQLQHENRS LAHRASHDSL TGLLNRAAFT EALDLAVRTA AARNQYAAVL YLDSDDFKGI
NDRYGHAAGD AVLVAVGQRL RGCLREGDSV ARLGGDEFAV LVNALRAPED AVRIAEHILN
AMATPVCLAD GTTIFAPLSI GLAVYPLHAR NGTALLHSAD AAMYGAKRQS GATWHSAESA
PPEPHL
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