Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2234 |
Symbol | |
ID | 4039052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2449285 |
End bp | 2450409 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637977629 |
Product | ABC transporter-related protein |
Protein accession | YP_584382 |
Protein GI | 94311172 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.10976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.112405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCA GCCTGGAAGG CATTGCGCAG CACGTGGGAT CGCAAGCCTA TCTTTACTCG ATGTCGCTGG CCCCCGTGCC TGGCGCCGTC ACGATCCTGC TGGGAACGAC CCAGGCGGGC AAGACATCGC TGATGCGGGT CATGGCAGGG CTGGACAAGC CCACCGCGGG CCGCGTGCTG GTAGACGGCG CCGACGTGAC CGGCGTGCCG GTGCGGGAAC GCAACGTGTC GATGGTCTAT CAGCAGTTCA TCAACTACCC GTCGCTGCGC GTCTTCGACA ACATTGCATC GCCGTTGCGG CTGCGGCGGG ATCGCCAGGC TGACGTCGAC GCGCGTGTTC GCTCGCTGGC GGGGCGCCTG CACATCGAAC ATCTGCTCGA CCGGTATCCC TCGGAGCTAT CTGGTGGCCA GCAGCAGCGT GTGGCCCTGG CCCGCGCGCT GGCCAAGAAT GCGCCGCTGA TGCTGCTCGA TGAGCCCCTG GTCAACCTCG ACTACAAGCT GCGCGAGGAA CTGCGCGAGG AACTGACGCA ACTCTTCGCG CAGGGCGATG CCACCGTGAT TTACGCCACT ACCGAGCCGG CCGAAGCGCT GCTGCTCGGT GGCCATACCG CCGTGCTCGA CGCTGGCGAA CTGCTTCAGT ATGGCCCGAC GCCGGAGGTG TTCCACTATC CGGCGTCACT GCGCGTGGCG CGCGCCTTCA GCGATCCGCC GATGAATCTT CTCGAAGGTG TGCTGGGGCA TGGCCGCGTC GTGCTGGCCG GCAACATTTC CATCCCGATG CCGGACGTGG CCCATGCCGA TGGGCCGGTA ACGGTGGGCG TGCGTGCTGG CGCGCTGCGG CTCGACGCCG TGCCACAGGC TGTGGCCGTG CCGGGCAGGG TGGCGCTGGC TGAACTGTCG GGTTCGGATA CGTTCGTGCA TGTCGATACA CCCGCCGGCA ATCTGGTGGC CCAGCTTACC GGTGTGCGCG ATCTCGAACT GGGCGCGCAG TTGTCGCTCC ATATCGAGCC AGCGCAGATC TACCTGTTCA ACGCGGACGG CGATCGCATA CACGCGCCGC GCCGTCCAGG CATGTCGCCG GCATCGGCAG GCCCGGTCGC CGCGATTACC GAGTCGGGAG CCTGA
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Protein sequence | MQLSLEGIAQ HVGSQAYLYS MSLAPVPGAV TILLGTTQAG KTSLMRVMAG LDKPTAGRVL VDGADVTGVP VRERNVSMVY QQFINYPSLR VFDNIASPLR LRRDRQADVD ARVRSLAGRL HIEHLLDRYP SELSGGQQQR VALARALAKN APLMLLDEPL VNLDYKLREE LREELTQLFA QGDATVIYAT TEPAEALLLG GHTAVLDAGE LLQYGPTPEV FHYPASLRVA RAFSDPPMNL LEGVLGHGRV VLAGNISIPM PDVAHADGPV TVGVRAGALR LDAVPQAVAV PGRVALAELS GSDTFVHVDT PAGNLVAQLT GVRDLELGAQ LSLHIEPAQI YLFNADGDRI HAPRRPGMSP ASAGPVAAIT ESGA
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