Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2080 |
Symbol | |
ID | 4038887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2258237 |
End bp | 2259409 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637977465 |
Product | cytochrome d1, heme region |
Protein accession | YP_584228 |
Protein GI | 94311018 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.79845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.193812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCA CCGCACTTCC CGTCGTGCTG GCACTGAGCG CGCTGCTCGC CGGCTGCGCC ACCGCGGTAC GTGGCACCGG CGATATGGGC GTCGTGGTCG AGCGCGCAGC CGGCCGCATC CAGGTCGTGG AAACCTCGGG CATGACCCGA CTGGCCACGA TCGATGGCTT CGGTGACCTG TCGCACGCCA GCGTGGTCTT CGCGCGCGAC GGCCGGTACG CCTACGTCTT CGGCCGTGAC GGTGGCCTGA CCCGCGTGGA CCTGCTGAAT GCCAAGGTGA CCCACCGTAC CATCCAGGCA GGCAACAGCA TCGGCGGCGC CATTACCCAG GATGGCCGCG TGGTGGCCGC GCAGAATTAC GAGCCCGGTG GCATCAGGTT GTTCGATGCC GCCACGCTCG AACCGCTCGC CGACATCCCC GCCATCGGCC CAGACGGGCG ACGCTCGAAG GTTGTCGGTC TGGCCGACCT GCCCGGCAAG CGGCTGGCGG CGAGCCTGTT CGAGGCAGGC GAGATCTGGA TCATCGACGT AGCCGACCCT CGCCACCCCA AAGTCACCAA GCTGCCAGCA GGCAAGCAGC CTTATGACGG GCTGGTGACG CCCGACGGCC GTTGGTATCT GGCGGGACTG TTCGGGGAGG ACGGCCTGGC GCTGGTGGAC CTGTGGCAAT CCCCGCCTGC CGCGCGGCAT GTCCTGTCCG GCTATGGACG TGGCTCCGCA CCGCTGCCCG TCTACAAGAT GCCGCACCTG CGCGGCTGGG CCATGGCGCA GGGCAAGGCA TGGCTGCCCG CCATCGGGCG TCATGAAGTG CTCATCGCCG ATACCGCCAA CGGCTGGCAG GAAGCCGGAC GCGTGGAAGT TGCGGGCCAG CCGGTGTTCG TGATGGCGCA GCCTGACGGA CGACAGGTCT GGGTGAACTT CGCGTTCCCG AACAACGAAA CCGTCCAGGT CATCGACACA GCCACCCGGA AGGTCGTGCG CACGCTCAAG CCTTGCCGTG GCGTGCTGCA CATGGAGTTC ACGCCCAAGG GCGAGGCAGT CTGGCTGTCG TGCCGCGACG ACAATCGCGT GGTGGTCTAC GACACGACCA GTTACGAGCC GTTGGCCACG CTGCCGGCGG ACCATCCAAG CGGCATCTTC TTCACCTCGC GCGCGCAGCG CTTCGGGATG TGA
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Protein sequence | MRRTALPVVL ALSALLAGCA TAVRGTGDMG VVVERAAGRI QVVETSGMTR LATIDGFGDL SHASVVFARD GRYAYVFGRD GGLTRVDLLN AKVTHRTIQA GNSIGGAITQ DGRVVAAQNY EPGGIRLFDA ATLEPLADIP AIGPDGRRSK VVGLADLPGK RLAASLFEAG EIWIIDVADP RHPKVTKLPA GKQPYDGLVT PDGRWYLAGL FGEDGLALVD LWQSPPAARH VLSGYGRGSA PLPVYKMPHL RGWAMAQGKA WLPAIGRHEV LIADTANGWQ EAGRVEVAGQ PVFVMAQPDG RQVWVNFAFP NNETVQVIDT ATRKVVRTLK PCRGVLHMEF TPKGEAVWLS CRDDNRVVVY DTTSYEPLAT LPADHPSGIF FTSRAQRFGM
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