Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1758 |
Symbol | |
ID | 4038560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1908007 |
End bp | 1908927 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977138 |
Product | hypothetical protein |
Protein accession | YP_583906 |
Protein GI | 94310696 |
COG category | [C] Energy production and conversion |
COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.404134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0201554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCTGCC CTGGACGCAC CCTGGTCACC TTGTGGATGT GGCTTGCCCT GTGGTGCTGC ACAATGCCGG CCCACGCGCA AGAACTCGAG CCACGCAGCT ATTCTGCCGC ACCTGTCGGG ACAAACTTCC TCGCCGCTAC CTATACCCGG CTCTCGGGGG ATGTGCTCAC TGATCCGTCG CTGCCCATCA CCGATGTACG CTCCAGAATC AACATCTTCG GGGCGGGCTA TGTGCACGTG TTTGATCTGG CCGGGCGGAC TGCCTCGATC GGCCTGCTTG CACCCTTCGC GAGTGGCGAC GTCAGTGGCA ACGTGCTCGA CGCGCCGACC GCGGTCCATC GGGCGGGGAT CGGCGACGCG CGCGTGCGCT TGGCCATCAA TCTCCTTGGC GGCCCCGCGC TGACACCGGC CGAGTTCATG AAACGGGCGC CGGACACCAT GCTCGGTGCG AGCCTCACAG TGGTAGCACC TACCGGCCAG TACGATGCCT CCCGGCTGGT CAACGTTGGG ACCCACCGCT GGGCCTTCAA GCCGGAAATC GGCCTGTCTC AGCCGATCGG CAACTGGTTT AGCGAGTTGT CTGCCGGCGT GTGGCTGTTC GGCGACAACA ACGCTTTTCT AGGCGATAAG CGGCGCGAGC AGTCGCCGCT CGGCGTGTTG CAGTGGCATG TCGGTTATCA GTTCCGGCCC GCCCTGTGGA TCGCGGCAGA CGCCGGCTTC TATAGCGGCG GCCGCACGTC GGTAAATGGC ATCCCCAATG CAGATCGTCA GCAGAACTCA CGCTATGGCG TCACGCTGTC CGTCCCGATC GTGCCTGGCT GGTCGGCCAA GCTGGCGGCA TCGAAGGGCC TCATCACCCG GGCGGCAGGT GACTACACGG CAATCACGCT GGCGCTCCAA TACCAGTGGA TCAACCACTG A
|
Protein sequence | MVCPGRTLVT LWMWLALWCC TMPAHAQELE PRSYSAAPVG TNFLAATYTR LSGDVLTDPS LPITDVRSRI NIFGAGYVHV FDLAGRTASI GLLAPFASGD VSGNVLDAPT AVHRAGIGDA RVRLAINLLG GPALTPAEFM KRAPDTMLGA SLTVVAPTGQ YDASRLVNVG THRWAFKPEI GLSQPIGNWF SELSAGVWLF GDNNAFLGDK RREQSPLGVL QWHVGYQFRP ALWIAADAGF YSGGRTSVNG IPNADRQQNS RYGVTLSVPI VPGWSAKLAA SKGLITRAAG DYTAITLALQ YQWINH
|
| |