Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1743 |
Symbol | |
ID | 4038545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1889915 |
End bp | 1890772 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977123 |
Product | AraC family transcriptional regulator |
Protein accession | YP_583891 |
Protein GI | 94310681 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.295048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.345273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGGC ATGGCATGAA GCATGGATTC TCAGGCGTGG ATCGAACAGG AAATGCGGCC GCCGCACCGT ACTGTCCGAG TGCACGGATC ACAATGTTCG AGCGCAGTAT CGCGATCACG ACGCAGGATC TTGTGTCCGG GCCTGTGAGG CGCCCGGCAA TCAGCGTGCT GCTCTCCCTG GATGACACGC CATTCTCCAT TTCAATCAAC GACGTGCCAG TGCCCAAAGC GCGGGCGTTC GTCGTGCGAG AGCTTGCGCC GCGCGCCATC CAGGCCTTGA ACTGCCAGCT TCTGAGCCTC AGTCTCGATC CGGGGCATCC GCTTTTTCTG TCGACACGCA AGGCATTGGG AGACAAGGAG TTCCTTGCGC TTCCAGACGG ACCGCTGCGG GCCTGCCGCG ATCCACTGCG CGGAGAACTA CTTGGCGCCG TGCCTCGCCA GCCGGATGAC CGGCTCATCG AAGCACTGTT GTCTTCGGCG CCGGATTTCT CCCTCCATTT GCGGGCGAAA TCGGCTTCGC GCCGAGAGCA CCTGCTCGCG CAATTCGAAT CGCAATGGAC TGAACCGCAT CTCGCGAGCA AGCTGGCGGC AGCGATGGAC CTTTCGGTCA GCCGGCTGTC CCATCTTTTC GTGGAAGAGG TCGGCGTGCC GCTTCGGACC TATACCCTCT GGCGGAAGTA CCGACACGCA TGCGCCAGGC TGCAGTCTCC TGGCAACCTG AGCACGCTGG CGCAGGATTG CGGCTTCTCG GACGCCGCGC ACATGACACG AACCTTCGTC AGCTACCTGG GCTTCTCACC AACCATGGTA AAAAGCCTGA GCCATATCCA TCGACCAGTC GAAGCACACC GTGCCTGA
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Protein sequence | MDRHGMKHGF SGVDRTGNAA AAPYCPSARI TMFERSIAIT TQDLVSGPVR RPAISVLLSL DDTPFSISIN DVPVPKARAF VVRELAPRAI QALNCQLLSL SLDPGHPLFL STRKALGDKE FLALPDGPLR ACRDPLRGEL LGAVPRQPDD RLIEALLSSA PDFSLHLRAK SASRREHLLA QFESQWTEPH LASKLAAAMD LSVSRLSHLF VEEVGVPLRT YTLWRKYRHA CARLQSPGNL STLAQDCGFS DAAHMTRTFV SYLGFSPTMV KSLSHIHRPV EAHRA
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