| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1565 |
|---|
| Symbol | |
|---|
| ID | 4038368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1685944 |
|---|
| End bp | 1687476 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637976949 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_583717 |
|---|
| Protein GI | 94310507 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.377781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA ACATCTTGTC CGGGCGCCAG CCTGCCCGAC CCGTAGCCAC GGAGCATTTC
GACGTGATCA TCGTCGGTGC GGGCATCTCG GGTGTAGGCT CGGCCTATCA CATGCGGACA
CAATGCCCCG GCAAGCGTTT CGTCGTGCTC GAAAGCAAGG ACAGCTTCGG AGGCACCTGG
CACACACACC GCTATCCCGG TGTGCGCTCG GATAGTGACC TCTACACCTT CGGCTACCGC
TTCAAGCCAT GGATGGGAAA ACCCATTGCG ACTGCAGAGG AAATCCTCAG CTACATGGCC
GAAGTAATCG AAGAAAACGA CCTCGCTCAG CACATCCGCT ATCGCCATCG CATCGACGCG
GCCTCCTGGT CTTCCGCCGA AGGACTTTGG ACCCTTGATA CCACACGCCT GGAATCGGGA
GAGCGCGTAC GATTCACCAC CAATTTCCTG TGGATGTGCC AGGGGTACTA TCGCCACGAT
CAGGGCTATC TGCCCGAGTG GACGGGCATG GACAATTTCA AAGGCCCGTT GATTCACGCG
CAGACCTGGC CCGAGGAACT GGACGTCCAG GGCAAGCGTG TGGTCGTCAT CGGCTCGGGC
GCTACCGCTG CCACCGTCGT GCCGGGACTG GCCCGCCTGG GTGCCAAGGT CACCATGCTG
CAACGCTCGC CCACATACTT CATCTCGGGA CGCAACGCCA ACGATCTCGC AAACGAGCTA
CGCCGGCTCG AAATCGACCC AATGTGGATC CACGCGATCA TCCGGAAGAA AGTCCTGATG
GATGGCGCCA TCTTCGCCCG CCGCTCACGT GAAGAACCAG AGGAGGTGCG CAAGGAACTG
CTTGCAGGGG TTCGCGCGCA GCTTGGCGAG GACTTCGAAC TCGAACCGCA TTTTTCACCA
CGCTACCGGC CTTGGCAGCA GCGGGTGGCG TTCATTCCCG ATGGCGACAT GTTCGCGGAA
ATTCGCGAGG GCAACGCCAT CGTGGTCACT GACGAGATCG ACCGGTTCGT CGAGGACGGC
GTCGTGCTCA AGTCCAACGA GAAGCTAGAC GCCGACATCG TTGTGGCCGC TACGGGCTTT
CAGCTCAGTG TGCTGGGCGA CATTCCGTTT AGCGTCGACG GCCAATCGCT GGATTTCTCG
AAAACCGTGA CCTATCGCGG CATGATGTTC ACTGGCGTGC CTAACATGGT CTGGGTGTTC
GGCTACTTCC GCGCCAGCTG GACGCTACGG GTTGACATGG TCGCCGACTT CGTCTGCCGC
CTGCTGAAGC ACATGGATGC CACAGGAGCA AAGCAAGTCA CCCCACAACT CCGTGAAGAC
GAGAAAGACA TGCCTCTATC CGAGTGGATA GACGCCGACA ACTTCAACCC CGGCTATCTC
ATGCGCGACA TCCAACTCAT GCCCAGGAGC GGCAACACGC GCGAGTGGCA ACACACGCAA
GACTACTGGG GAGAGAAGGA TGAGTTTCCC GAGATTGACC TAACGGATGG GGTATTCCGT
TACGACGCAA ATCGTCCGTC AGGTAATGCC TGA
|
|---|
| Protein sequence | MNANILSGRQ PARPVATEHF DVIIVGAGIS GVGSAYHMRT QCPGKRFVVL ESKDSFGGTW
HTHRYPGVRS DSDLYTFGYR FKPWMGKPIA TAEEILSYMA EVIEENDLAQ HIRYRHRIDA
ASWSSAEGLW TLDTTRLESG ERVRFTTNFL WMCQGYYRHD QGYLPEWTGM DNFKGPLIHA
QTWPEELDVQ GKRVVVIGSG ATAATVVPGL ARLGAKVTML QRSPTYFISG RNANDLANEL
RRLEIDPMWI HAIIRKKVLM DGAIFARRSR EEPEEVRKEL LAGVRAQLGE DFELEPHFSP
RYRPWQQRVA FIPDGDMFAE IREGNAIVVT DEIDRFVEDG VVLKSNEKLD ADIVVAATGF
QLSVLGDIPF SVDGQSLDFS KTVTYRGMMF TGVPNMVWVF GYFRASWTLR VDMVADFVCR
LLKHMDATGA KQVTPQLRED EKDMPLSEWI DADNFNPGYL MRDIQLMPRS GNTREWQHTQ
DYWGEKDEFP EIDLTDGVFR YDANRPSGNA
|
|---|
| |