Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1523 |
Symbol | |
ID | 4038326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1645822 |
End bp | 1646532 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637976907 |
Product | ferredoxin |
Protein accession | YP_583675 |
Protein GI | 94310465 |
COG category | [C] Energy production and conversion |
COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000171825 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00403982 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATTC AGATCACGAT CGACGGCATC ACGGTCACGA CGGAGGAAGG GCGAACGCTG GTGGACGTCG CCGCAGAAAA CGGCGTGTAT ATCCCGACGC TGTGCTACCT CAAGGACAAG CCCTGTCTTG GCACCTGCCG GGTGTGTTCG GTAAAAGTGA ATGGCAACGT GAACGCGGCG TGTACGGTGC GGGTCTCCAA GGGCTTGAAT GTCGAGGTCA ATAGCCCTGA AATGGTCGAT ATGCGCAAGG CGCTGGTCGA ATTCCTGTTC GCGGAGGGAA ACCACAACTG CCCGAGCTGC GAAAAGAGTG GCCGTTGCCA GCTGCAGGCG GTCGGCTACG AGGTGGACAT GATGGTCTCG CGCTTCCCGT ACCGTTTCCC GGTTCGCGTA CAGGACCAGG CTTCGGAGAA GATCTGGCTG GAGCGGGATC GCTGCATCTT CTGCCAGCGC TGTGTCGAGT TCATCCGCGA CAAGGCGACC GGCAGGAAGA TCTTCAGCAT CAGCCAGCGC GGTTCCGAGT CGCGCATCGA AATCGATGTC GAACTCGCGA ACGCCATGCC GCCGGAGCAA GTCAAGGAAG CGGTTGCGAT CTGCCCGGTT GGCACCATTC TCGAGAAACG GGTCGGCTAC GACGACCCCA TCGGACAACG CAAGTACGAA ATCCAGTCGG TGCGCGCACG CGCGCTGGGC CTGGAAGGAG TGGACAAATG A
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Protein sequence | MSIQITIDGI TVTTEEGRTL VDVAAENGVY IPTLCYLKDK PCLGTCRVCS VKVNGNVNAA CTVRVSKGLN VEVNSPEMVD MRKALVEFLF AEGNHNCPSC EKSGRCQLQA VGYEVDMMVS RFPYRFPVRV QDQASEKIWL ERDRCIFCQR CVEFIRDKAT GRKIFSISQR GSESRIEIDV ELANAMPPEQ VKEAVAICPV GTILEKRVGY DDPIGQRKYE IQSVRARALG LEGVDK
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