| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1273 |
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| Symbol | |
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| ID | 4038076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1395642 |
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| End bp | 1396637 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637976659 |
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| Product | phage integrase |
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| Protein accession | YP_583427 |
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| Protein GI | 94310217 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.010146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCG CCAGTCTCCC AGCCCTCGTT CAGCGCTTCT TCACCCAGCG CCTGCTCGAG
CAGCAAGGTC TGAGTTCGCA TACGGTGGCA AGTTACCGTG ACACGTTCCG GCTGTTGCTG
GCGTTCGCCA CGAAGCATAT AGGGCGCGCG CCGTCAAAGC TGCGAATCGA GGACTTCGAC
GTGTCGTTGA TCGAGGAATT CCTGCAGCAC CTCGAACACG GCAGAGGCAA TTCGGTGCGC
ACACGCAACA CGCGGCTTGC CGCCGTGCAT GCCTTCTTCC GGTTCGTCGC GGTCAGCGAG
CCTGCGTTGT TTCTGCTGTG TCAGCGCATT CTTGCAATCC CATCCAAACG CTGCGAGCAC
GGCCCGGTTG AGTTTCTGAC CGAGAGCGAG GCCGCCGCTC TGGTAGGGGC GCCTGACGTA
CGAAACTGGA TCGGCAACCG CGACCGAACG CTGCTTCTTG TAGCGGTTCA AACGGGTCTG
CGCAATAGCG AATTGACCGC ACTCCGGCGC CAGGATGTGG CGCTCGGCAC AGGCGCCCAC
GTTCGTTGCC TCGGCAAAGG CAGAAAGATG AGATGCACTC CGCTGCGACC GGATGTAGTT
GCCGTCCTGA AACAGTGGCT GCTGTATCAA CCAGGCGAGC CAGGCGATCC GGTCTTCCCC
AGTTCGCGCG GCGGTCATCT CAGTGCCGAT GCTCTTCAGC AACTCGTGTC GCGCAACGCC
GAAACCGCGC GCCTCTCGTG CCCCTCGCTG AAGAAGAAAT CAATAACGCC TCATACGCTT
CGACACACGG CCGCGATGAG CCTGATGCAT CACGGCGTCG ACCTGACCGT GATCGCACTC
TGGCTCGGGC ACGAGTCCTC CGAGACTACT CAGATCTATT TGCACGCCGA CATGCAGCTC
AAGGAACGCG CGCTCGCGCA CGCGACGGCG AGTGGTGTTG CACCGACACG CTACAAACCT
CCAGATCCGT TGCTCGCCTT CCTGGAGGCC CTCTGA
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| Protein sequence | MSAASLPALV QRFFTQRLLE QQGLSSHTVA SYRDTFRLLL AFATKHIGRA PSKLRIEDFD
VSLIEEFLQH LEHGRGNSVR TRNTRLAAVH AFFRFVAVSE PALFLLCQRI LAIPSKRCEH
GPVEFLTESE AAALVGAPDV RNWIGNRDRT LLLVAVQTGL RNSELTALRR QDVALGTGAH
VRCLGKGRKM RCTPLRPDVV AVLKQWLLYQ PGEPGDPVFP SSRGGHLSAD ALQQLVSRNA
ETARLSCPSL KKKSITPHTL RHTAAMSLMH HGVDLTVIAL WLGHESSETT QIYLHADMQL
KERALAHATA SGVAPTRYKP PDPLLAFLEA L
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