Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1230 |
Symbol | |
ID | 4038033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1350081 |
End bp | 1350797 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637976617 |
Product | ABC transporter-related protein |
Protein accession | YP_583385 |
Protein GI | 94310175 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0606758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0611511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCATG CCGCGATCAT TGACGCAGAT GGCGTCAACG CCTGGTATGG GTCGAGCCAC GTGCTGCGCG GTATCGACTT TCGCGTCGGC GCCGGCGAGT CGGTTGGCCT GCTTGGCCGC AACGGCATGG GCAAGAGCAC GCTGCTGCGG ACGCTGCTGG GCCACGTGCG CGAACGTGAA GGCGGGATCC GCGTGGTGGG GCGCGATATG TCGCGGGCGC GGCCGCATGA GGTCGCCCGG CTCGGCATCG CCTATGTCCC GGAGGGGCGG GGGATATTTC CTAATCTGAG CGTCCGCGAG AACCTGCTGA TGGCTGCGCG CGCCGGGAGC CAGGGCCGCA AGGACTGGGA CGAGGCCCGC GTGCTGGACC TGTTCCCACG CCTGAAAGAG CGGTTGTCGC ACGGCGGGCA GCAGTTGTCG GGCGGCGAAC AGCAGATGCT GTCGATCGGC CGCGCGCTGA TGACCAACCC GGATTGCCTG ATCCTGGACG AGGCCACCGA AGGGCTGGCG CCCAAAATCG TCCACGAAAT CTGGAATGTG ATCGCCACGA TACGGGCGAC GGGGATCGCG TCAGTCGTAG TCGACCGAAA CTACCGGGCC GTGCTGGCCC ATGTGGACCG GGTGGTCGTG CTGGAAAAGG GGCTGGTGGT CATGTCCGGG CCCGCTGCCG ATCTGGCCGC CGCGCCGGCG GCGCTGGACC GTTACCTGGG TGTTTGA
|
Protein sequence | MSHAAIIDAD GVNAWYGSSH VLRGIDFRVG AGESVGLLGR NGMGKSTLLR TLLGHVRERE GGIRVVGRDM SRARPHEVAR LGIAYVPEGR GIFPNLSVRE NLLMAARAGS QGRKDWDEAR VLDLFPRLKE RLSHGGQQLS GGEQQMLSIG RALMTNPDCL ILDEATEGLA PKIVHEIWNV IATIRATGIA SVVVDRNYRA VLAHVDRVVV LEKGLVVMSG PAADLAAAPA ALDRYLGV
|
| |