Gene Rmet_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1230 
Symbol 
ID4038033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1350081 
End bp1350797 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID637976617 
ProductABC transporter-related protein 
Protein accessionYP_583385 
Protein GI94310175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0606758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0611511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG CCGCGATCAT TGACGCAGAT GGCGTCAACG CCTGGTATGG GTCGAGCCAC 
GTGCTGCGCG GTATCGACTT TCGCGTCGGC GCCGGCGAGT CGGTTGGCCT GCTTGGCCGC
AACGGCATGG GCAAGAGCAC GCTGCTGCGG ACGCTGCTGG GCCACGTGCG CGAACGTGAA
GGCGGGATCC GCGTGGTGGG GCGCGATATG TCGCGGGCGC GGCCGCATGA GGTCGCCCGG
CTCGGCATCG CCTATGTCCC GGAGGGGCGG GGGATATTTC CTAATCTGAG CGTCCGCGAG
AACCTGCTGA TGGCTGCGCG CGCCGGGAGC CAGGGCCGCA AGGACTGGGA CGAGGCCCGC
GTGCTGGACC TGTTCCCACG CCTGAAAGAG CGGTTGTCGC ACGGCGGGCA GCAGTTGTCG
GGCGGCGAAC AGCAGATGCT GTCGATCGGC CGCGCGCTGA TGACCAACCC GGATTGCCTG
ATCCTGGACG AGGCCACCGA AGGGCTGGCG CCCAAAATCG TCCACGAAAT CTGGAATGTG
ATCGCCACGA TACGGGCGAC GGGGATCGCG TCAGTCGTAG TCGACCGAAA CTACCGGGCC
GTGCTGGCCC ATGTGGACCG GGTGGTCGTG CTGGAAAAGG GGCTGGTGGT CATGTCCGGG
CCCGCTGCCG ATCTGGCCGC CGCGCCGGCG GCGCTGGACC GTTACCTGGG TGTTTGA
 
Protein sequence
MSHAAIIDAD GVNAWYGSSH VLRGIDFRVG AGESVGLLGR NGMGKSTLLR TLLGHVRERE 
GGIRVVGRDM SRARPHEVAR LGIAYVPEGR GIFPNLSVRE NLLMAARAGS QGRKDWDEAR
VLDLFPRLKE RLSHGGQQLS GGEQQMLSIG RALMTNPDCL ILDEATEGLA PKIVHEIWNV
IATIRATGIA SVVVDRNYRA VLAHVDRVVV LEKGLVVMSG PAADLAAAPA ALDRYLGV