| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1119 |
|---|
| Symbol | |
|---|
| ID | 4037917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1222378 |
|---|
| End bp | 1223451 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637976501 |
|---|
| Product | putative FecR |
|---|
| Protein accession | YP_583274 |
|---|
| Protein GI | 94310064 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.52512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGGT CTTGCGCCCC GGTCGAGAAT CCGATGAGCC AATCCGTCGA TGTCCGCGAA
GCAGCGGCGC GCTGGTTCTC GCGCAATCAG GCCCCGGCGC TCAGCCCGGC CGAGCAACAG
GCATTTGCCG CATGGCTGGC GGCCAGCGCC GAGCATCGCG CCGAGTACGC GGCGCTCGAA
CGCGTCTGGC AAGCCGCGGC AGCCATCGAT CCGGACAGGC TACGCAAGCT GGCCGTGGAT
GAAAGCGCCT GCCCGACACC CCCACTATCG CCCCCAATAT CGCGCCGGGT ATCGGCCGGC
TGGCGCCCCG CCCTGCTCGG GCTGTGCGCG GCACTGGCCA TCGGCATTGG CTGGATCGGC
TGGCAGCATG ACGCGGCGGT TGCCACCAAC GCTGAATACC AGACCGCACC GGGCGAACGC
AGGACGCTGA CGCTCGACGA CGGATCGCGC ATCGAACTCA ATACCCGCTC GCGCCTGGAG
ATTCATTACA GCGCCGGCAC CCGTCGCGTG ACCTTGCGCG AAGGTGAGGC GATGTTCGAG
GTGTCACACG ACGCCGCACG CCCGTTCGTG GTTGATGCGG GCATGGGCAC CGTTACCGTA
ACCGGCACCC GTTTCGACGT CCGACGTGAC ACATCGGGCG TGGACGTATC GGTCGAATCC
GGCTCGGTAG ACGTGAGAGG CAGCGTGAGA GGCAGCGTGA GAGGCAGCGC AAAAGACAGC
GTGAAAGGCA ACGCCGGCCG GACACCCGAC ACGCGCCTGT CCGCAGGGCT CGGCGCGCGC
ATCGCCAGCG ACGGTACCGT GACCGGCGCG GCCTCGATCG ACCTGCCCGG CGTCCTGGCC
TGGCGCGAAG GCAAGCTCGT CTTCAACGAC GCGCCGCTCT CGGCCGTGGC GGCCGAAGTC
TCCCGCTATC GGCAACAGCC CGTGCGCGTG GCAGATGCCG CGACGGGCAG CCTGCGCGTC
AGCAGCGTGT TCAGCGCCGA CGACACGTCG GGCCTGCTGG CCGCGTTGCC GCAGATGCTG
CCGGTGGGCG TGCGCAACCT GCCAGACGGC AGCACCGAAA TTTTTTCGCA CTAA
|
|---|
| Protein sequence | MQRSCAPVEN PMSQSVDVRE AAARWFSRNQ APALSPAEQQ AFAAWLAASA EHRAEYAALE
RVWQAAAAID PDRLRKLAVD ESACPTPPLS PPISRRVSAG WRPALLGLCA ALAIGIGWIG
WQHDAAVATN AEYQTAPGER RTLTLDDGSR IELNTRSRLE IHYSAGTRRV TLREGEAMFE
VSHDAARPFV VDAGMGTVTV TGTRFDVRRD TSGVDVSVES GSVDVRGSVR GSVRGSAKDS
VKGNAGRTPD TRLSAGLGAR IASDGTVTGA ASIDLPGVLA WREGKLVFND APLSAVAAEV
SRYRQQPVRV ADAATGSLRV SSVFSADDTS GLLAALPQML PVGVRNLPDG STEIFSH
|
|---|
| |