| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0915 |
|---|
| Symbol | |
|---|
| ID | 4037711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1000497 |
|---|
| End bp | 1001081 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637976295 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_583070 |
|---|
| Protein GI | 94309860 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGTGC ATATCAGCGC GGGCTTCTGG GGCGCTCTGC CGCTGTGGAT CGTCACGCTG
TTCGTGCTTC AGTTCTTTCG CGATCCGCCT CGGCCGATTC CGTCTGCGCC AAACGCAATC
CTGGCGCCTG CCGATGGCCG CATTGTCGTG GTTGAGAAAA CGCAGGACCC GTACGCGGGC
CGCGAGGCAC TGAAGATCAG CGTGTTCATG AATGTGTTCA ACGTGCACTC GAACCGCTCG
TCGCTCGATG GCAAGGTGGA GAAGCTCGAG TACTTTCCCG GCAAGTTCGT CAATGCCGAT
CTCGACAAGG CATCGATGGA GAACGAGCGC AATGCCGTCG TGATCCGCCG TGCGTCGGAT
GGCCAGGTGG TGACGCTGGT GCAGGTGGCT GGTCTGGTGG CGCGCCGTAT CCTGTGCTAC
ATCAATGTGG GCGACATGCT GTCGCGTGGT CAGCGCTACG GCTTTATCCG TTTCGGTTCG
CGGGTGGATG TGTACCTGCC CACGGATGCC CGTCCGCGCG TGACGATTGG CGAGAAAGTT
TCGGCGTCGG CGACCGTGCT GGCTGATCTG GATGTGCGGG CGTAA
|
|---|
| Protein sequence | MLVHISAGFW GALPLWIVTL FVLQFFRDPP RPIPSAPNAI LAPADGRIVV VEKTQDPYAG
REALKISVFM NVFNVHSNRS SLDGKVEKLE YFPGKFVNAD LDKASMENER NAVVIRRASD
GQVVTLVQVA GLVARRILCY INVGDMLSRG QRYGFIRFGS RVDVYLPTDA RPRVTIGEKV
SASATVLADL DVRA
|
|---|
| |