| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0648 |
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| Symbol | |
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| ID | 4037437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 715009 |
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| End bp | 715854 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976023 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_582803 |
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| Protein GI | 94309593 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.130635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.420596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA CGCGAGCAAT CCTGATGCTG CTGATTGCGC TGGTGGCCGG CGCGGCGGCG
GTGGTTTCCG CATCCCGCTG GCTGCTGCAG CAGTCGTCCA GCTCGGTCAA GCAGGTGGTG
GTGGCCGCGA ACGATCTCGA TCTCGGCCAG CCGCTCAATG GCAGCCAGCT CAAGCTCGTC
AGCTGGCCCG CCGGCAGCGT GCCGCCCGGT GCGTTCGAAG ATCCCAAGAC GCTGGACGGG
CGCGTGGTCC GCACCAGCTT GCAACGCGGC GAGCCCATTA TCGACGCGAA GCTGGCGCCG
GTGGGCACCA AGGGCGGCCT CTCCGCCGTC ATCAACGACG GCAAGCGCGC CATCACGGTT
CGTGTCAACG ATGTGGTGGG CGTGGCTGGC TTCGCGCTGC CAGGCAACTA CGTCGATGTG
ATCGTCAACA CCAACGAGGA CACCAAGAGC GCGCAGAACG GCAGCATCTC GAAGATCGTG
CTCGAGAAGA TTCTGGTGCT GGCCGTGGCG CAACAGGTCA GCCGCGATGA CACGCAGCCG
AAGGTGGTCA ACGCCGTGAC GCTGGAAGTC TCGCCGGATC AGGCCGAGAA GCTCGACGTG
GCGCGCAGCG TGGGAACGCT GTCGCTGGTG CTGCGCAATC AGATGGACGT GGCCGACATC
AACACGGGCG GCGCCACCAA GCACACGCTG CTCGGCAAGG CCGAACTGCC CGCGCCGGCT
CCGCTCGCTG CGCCGGCTCC CGTTACGCGC ACGGTGGTCA AGACCCGCAC GGTCGCCGCC
GCACCGCGCG CTGGCAACTG CGTCGGCGTG CTCGCAGGCA TCCAGGGCAG CCTGGAGTGC
TTCTGA
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| Protein sequence | MKNTRAILML LIALVAGAAA VVSASRWLLQ QSSSSVKQVV VAANDLDLGQ PLNGSQLKLV
SWPAGSVPPG AFEDPKTLDG RVVRTSLQRG EPIIDAKLAP VGTKGGLSAV INDGKRAITV
RVNDVVGVAG FALPGNYVDV IVNTNEDTKS AQNGSISKIV LEKILVLAVA QQVSRDDTQP
KVVNAVTLEV SPDQAEKLDV ARSVGTLSLV LRNQMDVADI NTGGATKHTL LGKAELPAPA
PLAAPAPVTR TVVKTRTVAA APRAGNCVGV LAGIQGSLEC F
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