Gene Rmet_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0589 
Symbol 
ID4037378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp632195 
End bp633967 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content69% 
IMG OID637975964 
Producthistidine kinase 
Protein accessionYP_582744 
Protein GI94309534 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGC CATGGCGTCG CGTCGCGCCG TTCGTCGCCC TGCTCGCGCT GGCCGCCCTG 
GTCACGCTGG CCGGGTGGCT CGGCTATCGC TATACGTACG ACACCGCGCT GGCCCGCCAG
GCCGAGCGCG GCCAGGTGCA ACTGCGCCTC TACGCCCAGG CGCTGGAAAG CGAGCTGGCG
CGCTACGACT ACGTGCCGAG CCTGCTGTCG CTGGACGCGC GGATCGAAGG GCTGCTGCGC
GAGCCGGGCG ATCCCGCGCA CGTGGCGCAA GCCAATGCCT ATCTGGCATC GCTGAACATC
CGCGCCGGCA CGCGCGTGGT CTATGTGCTC GACGCCCGCG GCAAGGTGCT GGCAACGAGC
AACTACCAGC GCCCCGACAG CTACCTGGGC GAAGACCTGA GCTTCCGCCC CTATTTCCGC
ACGGCCATCG ACGGCCAGCT CGGGCGCTTC TACGGCGTGG GCACCACGCG CAGCGAATCC
GGCTACTACC TGTCCGCGCC GCTCGGCGAC CGTGACCGGC CTCAGGGCGT GGCCGTGGTC
AAGATCGGCC TCGAACCGCT GGAGAACCGC TGGCAGGGCA ACGACAGCCA GATGCTGCTG
GCCGACGAGA ATGGCGTCGT GATCCTGGCC TCCGATCCAT CATGGAAGCT GGCCGCCTTG
CGGCCGCTCT CCGCCGACCA ACGCGCGAAG CTGGACCGCA GCCTGCAGTA CAACCGCGCG
CCGTTGGCGC AACTGGAACT GTCCAAGGTC CGCGCGCTCG GCACCGGCCC GGCCGAGGGC
GGCGACGCCC TGATGCGTCT GCGCCAGGGC CCGCCAATGC TGGCCCAGCA TCTGGCGCTG
GCCGGCACGG ACTGGAATCT CACTCTGCTC ACCAACACCT CGCAGGCACG CGTGGCAGCG
CTCAACAGCG CCGCGCTGGA AGCAGCCAAC AGCGAACTCG AGCGCAAGGT GGCCGAGCGC
ACCGCCGACC TGTCCGCCAC CAACCAGCAG CTTCATGCCG AAGTGGCCGA ACGGATCCGC
ACCGAGACAG TGTTGCGCCA GGCCCAGGAC GGCCTGATGC AGGCCGGCAA GCTCGCCGCC
GTAGGCCAGA TGTCGGCCGG CATCGCACAC GAACTGAACC AGCCCCTGAC CGCGCTGCGC
ACGCTGTCCG GCAACACGGG CAAGTTCCTG GAACGCGGCG ACTACGCGAC GGTGCAGCAC
AACCTGGACA AGATCGTCGG ACTGGTGGAG CGGATGGGTC GCATCACGGG CGCGCTCAAG
TCGTTTGCCC GCAATCCATC GGCCAGCCAG CGCAGTGTGG CGTATCTGGG CGACGCCGTT
GAAAATGCGC TGTTCCTGCT GGAAACGCGT GTGGCGGCCG TGGCGCCGCG CATCGAGCGC
CAGATCGACG CGCGCCTGGC CGTGGCCTGC GATCCGAACC GCCTCGAACA GGTGCTGGTC
AACCTGATCG GCAATGCGCT CGACGCGCTG CGCGACCGCC CCGATCCCCT GCTGTCGTTG
CACGCCTACG AAACCGGCGA AAACGGCGGC ATGGTGCATC TGACGGTGCG GGACAACGGC
CCCGGCCTCT CCGAAGCCGC GTTCGCGAAG CTGTTCGAAC CGTTCTTCAC CACCAAACCC
GCGGGCGAAG GGCTCGGCCT TGGGCTCACC CTGTCGGCCG GCATCCTCAA CGAGAACGGC
GGCACCCTGA CCGCGATCAA TCACCCCGAT GGCGGCGCCT GCTTCACGCT GGCGCTGCCG
CAGGCGCGCG AGACACTTCG CCATGTCGGC TAA
 
Protein sequence
MPSPWRRVAP FVALLALAAL VTLAGWLGYR YTYDTALARQ AERGQVQLRL YAQALESELA 
RYDYVPSLLS LDARIEGLLR EPGDPAHVAQ ANAYLASLNI RAGTRVVYVL DARGKVLATS
NYQRPDSYLG EDLSFRPYFR TAIDGQLGRF YGVGTTRSES GYYLSAPLGD RDRPQGVAVV
KIGLEPLENR WQGNDSQMLL ADENGVVILA SDPSWKLAAL RPLSADQRAK LDRSLQYNRA
PLAQLELSKV RALGTGPAEG GDALMRLRQG PPMLAQHLAL AGTDWNLTLL TNTSQARVAA
LNSAALEAAN SELERKVAER TADLSATNQQ LHAEVAERIR TETVLRQAQD GLMQAGKLAA
VGQMSAGIAH ELNQPLTALR TLSGNTGKFL ERGDYATVQH NLDKIVGLVE RMGRITGALK
SFARNPSASQ RSVAYLGDAV ENALFLLETR VAAVAPRIER QIDARLAVAC DPNRLEQVLV
NLIGNALDAL RDRPDPLLSL HAYETGENGG MVHLTVRDNG PGLSEAAFAK LFEPFFTTKP
AGEGLGLGLT LSAGILNENG GTLTAINHPD GGACFTLALP QARETLRHVG