| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0499 |
|---|
| Symbol | |
|---|
| ID | 4037288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 528432 |
|---|
| End bp | 529565 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637975874 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_582654 |
|---|
| Protein GI | 94309444 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.621356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAG AGGACATGCA CGAGACCATT CGTGGTCTCT ATCAAGGCGT TCTGGAACCG
CAGGCCTGGC AGCGCAGCCT GTCCGCGCTA TGCGACCTCA GCCAGAGCGA GCGCGCCTCG
CTCCTGGTTT TCGACCCCGC GAGCGGCAGT GTGAGCGTGC GGCAGACGGC CGCGCTTGCT
GCCCTTGCCT CGCAGGCAAC GCCCCACGAT TCGCCGCAAA CGCTTTCCTT CAACGAACGG
CTGAACGTGG GCGGTTGGTT CATTCATCGA CGCGACACGG GATTCGCTGC AACCCTCGGC
GCCTTTCCGC AGGAGGACAT CGCCGGCGTT GCACCCGCTT CGATGATGAC CTGCCTGATC
GACAGGCAGC CCGGCCACGA GATCTACCTG TCGCTGCAGC GTCCGGCCGG CGCCGATGGT
TTCCTGGAAG CCGATGCCCG CGCCCTGGAC TGGATCATTC CGCACCTGCG CGAAGCAGTG
GCCATGCGCG ACCGCGCGCA GGCCGCCAGC ACGCATGGCC GCGTGTCAGC CAATCTGCTG
AACCAGTTGC CATTCGGCGT GATCGTCTTC ACGGCTGCCG GCGAGCCACT GCTGGCGAAT
GCGGCAGGCG AGCCGTGGAT CGGCCGACTG ATGCCGATAC GCGCGGACGG CGCCGCCGAC
GGCACGCTGG TACCGGCTGG ACAAGGCTGG CGGCTCTCGA AGCCGTTCCA CGAAGTCATG
CGCGGGCTCA CCGATGCGGG CGCGCCGCTG GAGGCTGGCG CCATTCACGC CGTGAGCACG
GACGGCCACG AGGCCCAGAT CGTTGCGATG CGACTGACGC CGGGCACGCC GCTGTCCTCG
GCATGTCTCG GGCAGCCCCT GCTGGTGGCG ATTCACGAAA GCCACGGCAC GCCGCGGACG
GTCCCCACCG TGCTGCGCGA CCTCTACGGC CTGACGCCAG CGGAAACGCG GCTCGCCGCG
CTGCTGACCA CAGGCATCGG CCTGCCGGAG GCGAGCATCC AGCTCGGCAT CAAGCGCGAG
ACGGGCCGGT CCCAGCTCAA GTCGATCTTC ACCAAGACCA ACACGAGCAC GCAGGCGCAG
CTTGCTCACC TGCTCACGCG ACTGGGCAGC GTGCTGGCCG AACCCGCGCG GTAG
|
|---|
| Protein sequence | MVTEDMHETI RGLYQGVLEP QAWQRSLSAL CDLSQSERAS LLVFDPASGS VSVRQTAALA
ALASQATPHD SPQTLSFNER LNVGGWFIHR RDTGFAATLG AFPQEDIAGV APASMMTCLI
DRQPGHEIYL SLQRPAGADG FLEADARALD WIIPHLREAV AMRDRAQAAS THGRVSANLL
NQLPFGVIVF TAAGEPLLAN AAGEPWIGRL MPIRADGAAD GTLVPAGQGW RLSKPFHEVM
RGLTDAGAPL EAGAIHAVST DGHEAQIVAM RLTPGTPLSS ACLGQPLLVA IHESHGTPRT
VPTVLRDLYG LTPAETRLAA LLTTGIGLPE ASIQLGIKRE TGRSQLKSIF TKTNTSTQAQ
LAHLLTRLGS VLAEPAR
|
|---|
| |