Gene Rmar_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1776 
Symbol 
ID8568428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp2082115 
End bp2082771 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003291048 
Protein GI268317329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0293549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCAT CCGAAACAAC CCCGGCGGCC GTGCGCGCGC GCATCCTGGA AACGGCACGA 
CGACGCTTCT TCCGGGAAGG CTATGCGCGG GTGACCATGG ATGAACTCGC CCGCGCGCTG 
GGCATGAGCA AAAAAACGCT CTACCAGCAC TTCCCCACCA AAGCCGCACT CGCCGCGGCC 
GTCATGGAAA CCTTCCGATC GCAGGTGGCC GAAGGCCTCG GCCGCATTTT CTCGGACCAC 
ACGCTGTCGC TCCCCGAACG CCTGGCCCGC GCCTTCGCCG AAGCGGCCCG CCACCTGCGC 
CAGATCGAAA AGCCGTTTCT GGAAGACCTG GCCCGCTTCC TCCCCGACGT CTGGGCCGAA 
ACCGAACGCT TCCGCTCCGA GACGATCGCG CGCCTGCTGG GCAACGCGCT CCGGGAAGGT 
CAGGCGGCCG GGTTCATCCG GACCGACGTG CCCGTGGAAA TCATGCTCCG GAGCTTTCAG 
GCCGTGGCCG AGCGTCTGGT GACGCCTTCG GCACTCATGG AACTGCCCTA CACGCTCCCG 
GAGATGATTC GTCTCGTGAT CCGGCTGCTG TTCGAGGGGG TGCTGACCGA CGCCGCCCGC 
GCCGACTTCC GAAAAGCCCT CGATGCGATT GCTTCCGGGG AAAATCTGAC CACCTGA
 
Protein sequence
MVSSETTPAA VRARILETAR RRFFREGYAR VTMDELARAL GMSKKTLYQH FPTKAALAAA 
VMETFRSQVA EGLGRIFSDH TLSLPERLAR AFAEAARHLR QIEKPFLEDL ARFLPDVWAE 
TERFRSETIA RLLGNALREG QAAGFIRTDV PVEIMLRSFQ AVAERLVTPS ALMELPYTLP 
EMIRLVIRLL FEGVLTDAAR ADFRKALDAI ASGENLTT