Gene Rmar_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1721 
Symbol 
ID8568373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1995673 
End bp1996398 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003290993 
Protein GI268317274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0001524 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGC TGAGCCTGCT GCTGATGCTG CCTCAGGCTG CCGCCGGAGA AGAAGGCTTC 
ATTAACGTCC TGGTCCAGCG CTTCAACGAA GGCGGCGAAT TCATGTGGCC GGTCTTGATT 
TCGCTCATTA TCGGTCTGGC CATTGCCTTC GAGCGGATCA TCACGCTGAA CCTGGCCGAC 
ATCAACACGC GCAAGTTCAT TCTTCAGGTG AAGAAAGCGC TGGAGGAGGG CGGTATTCAG 
GCGGCCGAGG AAATCTGCGC CAAGACGCGC GGACCGGTGG CTTCGGTTTT CCAGGCCGGG 
CTGCTCCGGG CCGACGAGGG TATCGAAGCC GTCGAGAAGG CGATCGTATC GTACGGTTCG 
ATCGAGATGA GCTTTCTGGA ACGCGGGCTG GTGTGGCTGT CGCTGTTCAT CTCGCTGGCC 
CCGATGTTCG GCTTCCTCGG TACGGTCGTC GGCATGGTGC AGGCCTTCGA CGCCATCGAA 
CAGGCCGGTG ACATTTCGCC CAGCCTGGTG GCCGGTGGTA TCAAGGTGGC CCTGCTTACC 
ACGGTCTTCG GTCTGATCAC GGCCATCATC CTGCAGTTCT TCTATAACTA CGCGGTTTCG 
AAGATCGACC GGATCGTGGT GGACATGGAG GAGGCCTCGA TCGAGCTGAT CGACTCGCTG 
GTGCTGATGC AGGCCGGGCG GCCGCTGACC GCAGCCGAGA AGGCGGAAGC GTCCAAGCAG 
TCGTAA
 
Protein sequence
MELLSLLLML PQAAAGEEGF INVLVQRFNE GGEFMWPVLI SLIIGLAIAF ERIITLNLAD 
INTRKFILQV KKALEEGGIQ AAEEICAKTR GPVASVFQAG LLRADEGIEA VEKAIVSYGS 
IEMSFLERGL VWLSLFISLA PMFGFLGTVV GMVQAFDAIE QAGDISPSLV AGGIKVALLT 
TVFGLITAII LQFFYNYAVS KIDRIVVDME EASIELIDSL VLMQAGRPLT AAEKAEASKQ 
S