Gene Rmar_1521 details

Gene Information

• Locus tag: Rmar_1521
• ID: 8568172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1774563
• End bp: 1775279
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 64%
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_003290796
• Protein GI: 268317077

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.565129
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCTGC TGCAAGCCGT CTCGTTGCCG ACCGATACGC TAAACGCATT GGTTCCGCCC 
GCTACTTCCA TGTCGCTGCT CGACATCCTG GTGCAGGGCG GGTGGATCAT GATCCCTATC 
GGGCTGCTTT CGCTGCTTAC CATCTACCTG ATCGTCGAGC GCCTCATCAC CGTGCAGCGG 
GCCAAAACCG ACCCGCGCCA GATCATGGAT CGCGTGCGCG ACTACGTGGA GGCCGGCGAC 
ATCCGGGGTG CGCTGGCCTA CTGCGAGGCG CAGGACAAAC CCATCACGCG CATCCTGCGC 
CGGGGACTGG AGCGGCTGGG CCGCCCGATC TCGGAGATCC GCGATGCCGT CGAAGCGGCC 
GGCAAGTACG AGGCGTTCGA GCTGGAAAAA CGCATGGACA TCCTGGCCAG CATCGCAGGC 
ATCGCCCCCA TGCTGGGTTT CCTCGGCACG GTGACCGGCA TGATCGAAGC CTTCCAGCAG 
ATCCAGAACC TGCAGGGCAA CGTGAACCCC AGCGTGCTGG CCGGTGGTAT CTGGGAGGCG 
CTGCTCACCA CGGCGTTCGG CCTGGTGGTA GGGATTCTGG CCCTGTTCGG CCACAACTTT 
CTGCTGACGC GCATCAATCG GCTGGTCAAC GACATGGAGC GGTCCGCCAC GGACTTCATC 
GACCTGCTGC AGGAGCCGGT GCCGCGTCCG CGTCGCCAAC CCGAAACCCT GCTCTGA 

 

Protein sequence

MVLLQAVSLP TDTLNALVPP ATSMSLLDIL VQGGWIMIPI GLLSLLTIYL IVERLITVQR 
AKTDPRQIMD RVRDYVEAGD IRGALAYCEA QDKPITRILR RGLERLGRPI SEIRDAVEAA 
GKYEAFELEK RMDILASIAG IAPMLGFLGT VTGMIEAFQQ IQNLQGNVNP SVLAGGIWEA 
LLTTAFGLVV GILALFGHNF LLTRINRLVN DMERSATDFI DLLQEPVPRP RRQPETLL