Gene Rmar_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1215 
Symbol 
ID8567862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1422455 
End bp1423627 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content69% 
IMG OID 
Productaminotransferase class V 
Protein accessionYP_003290493 
Protein GI268316774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.727858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGC CCCAGGTTAT CTACCTGGAC CATGCCGCCA CGACGCCGCT CGATTCGCGC 
GTGCTGGAGG CGATGCGGCC GTACCTGGAG GAGCACTACG GCAATCCATC GTCGGTGCAC
CAGCTCGGCC GTCGGGCGCG CGTGGCCATC GAAGAGAGCC GTGAACGTAT TGCCGCGCTG
ATCGGCGCCG AGCCGGCCGA GATCGTCTTC ACCAGCGGCG GCACCGAGGC CGACAACCTG
GCGCTCCGGG GCGTACTGCA CGGGACGCGC CGGCACCTGA TCACGTCGTT GGCCGAGCAC
GAGGCCATCC TGCGCACGGC CGAAGCGCTC GAAGAGGAGG GTGCGGCGGT CACCTACCTG
CGGCCCGGAC CCGACGGAGC CGTCACGGCC GAGCAGGTGG CCGAAGCCCT CACGGAGAAG
ACGGGGCTGG TGTCGATCAT GCACACGAAC AACGAGCTGG GCACCTACTC ACCCGTCCGC
GCCATTGCCG AGGTGTGCCA CCGCCGGGGC GTGCCGCTGC ACTGCGACGC GGTGCAGGCT
GTGGGACTGC TGCCCGTGCG CGTGGATGAA CTGGGCGTGG ATCTGCTCTC GGCCTCGGCG
CACAAGTTCT ACGGGCCCAA GGGCGTGGGC TTTCTGTACG TGCGGCGCGG CATCGAACTG
CGACCGCTGC TGTGGGGCGG CAAACAGGAA CAAGGACGGC GGGCCGGTAC CGAGAACGTG
GCCGCCATCG TGGGCATGGC GCGGGCGCTG GAGCTGGCCG TCGAGGATCA GGAGGCGCGC
CTGAACCATC TGCGACGGCT CCGCGATCGG CTGATCCGGC GACTGGACGA AGCGCTGGGC
GACACGTTCG TGCTCAACAC GCCGCGCGAT CCGGAGCGGG CCGCCCCGCA TATCGTCAAT
ATCGCCTTCC CGCCGCAGAA CGGCGAGCCG GTCGACGGCG AAATGCTGCT GCTCAACCTG
GATCTGGAGG GGGTGTGCGT CTCGTCCGGC TCGGCCTGTA CGAGCGGGGC CGTCGAACCC
AGTCACGTGC TGCGGGCCAT CGGGCTGCCC CGCGAAACGG CCGGAGCCGC CGTGCGCTTT
TCGATGGGCT GGAAGAACAC CGAGGCGGAA ATCGATCGGG CCGTCGAAAT CCTGGCGGCC
GTGATGGCCC GCCTGGCAGG CGTGCTCCGC TGA
 
Protein sequence
MQKPQVIYLD HAATTPLDSR VLEAMRPYLE EHYGNPSSVH QLGRRARVAI EESRERIAAL 
IGAEPAEIVF TSGGTEADNL ALRGVLHGTR RHLITSLAEH EAILRTAEAL EEEGAAVTYL
RPGPDGAVTA EQVAEALTEK TGLVSIMHTN NELGTYSPVR AIAEVCHRRG VPLHCDAVQA
VGLLPVRVDE LGVDLLSASA HKFYGPKGVG FLYVRRGIEL RPLLWGGKQE QGRRAGTENV
AAIVGMARAL ELAVEDQEAR LNHLRRLRDR LIRRLDEALG DTFVLNTPRD PERAAPHIVN
IAFPPQNGEP VDGEMLLLNL DLEGVCVSSG SACTSGAVEP SHVLRAIGLP RETAGAAVRF
SMGWKNTEAE IDRAVEILAA VMARLAGVLR