Gene Rmar_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1156 
Symbol 
ID8567802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1342682 
End bp1343794 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003290434 
Protein GI268316715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.876276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCAAC TCGTCTCCGG CAGCCTGCTG GGGCTGTTCG GGCTGGCCTA TGCGGCCTAC 
TGGATCCCGC CGGAGGCGGC CTGGTGGCTG CAATTGCTGG CGGTTGGCTT GCCGCTGCTG
GTGGCAGCAT TGGGCGTGCT GGCGCTGGTA CTGCTCTGGC AGCGCCGCTG GCTGATGGCA
GGGGGCGCGT TGCTGGCGCT ATTGCTCTAC GGCCTGCGAC ACGGCTGGCC GGGAGGGGCG
GAGCCGTCCG GTGCGGAGGC TGACGATACC CTTGTAGTGA TGACCTACAA CGTGCCGGAA
AGTCGCCGGC CTGCGCTGGG TGATTCGTTG CAGGCGCTGG TATTGCGCTA CCGGCCGCAG
CTCATCGGCT TTCAGGAAGT GGGCGTCTGG CGCTACGAGC AGCGGGGACG TCCGTCCACG
GTGCGCCTGA TCGGGCATCT GCGGCCGCTC GTGGAACGTC AGGGCTTCCG GTTTTCGGTG
CCTGATCCGA CGCGCGGGCC CATGTTTGCC GAGGTGGTGA CGTTGACGCG CCTGCCGGTC
GTTCGGCAGG AAATTCGCCT GCTGGAACGC GGACCGGAAG GGTTGATCTA CCAGGCCGTG
CGGAGCGAGC TGTGCTGGGC GGGTCGCCTT TTTGTACACT ACAATGTGCG GCTGCAGTCG
TATGGCCCGG TCAAACCGTG GGAAGTGCTG CGCGATGGCG GTTGGAAGCG TCCGGCAAAC
TGGCGCCGAT GGCTGGGCGC CTACCGACGG GCCATGCTGC AACGGGCGGC TCAGGTCCGG
CAACTCCGTG CCTGGATCGA TCAGGAGGAG CTGCCCGTCA TCCTGAGCGG CGACTTCAAC
AGCACGCCCG ACCAGTGGTT TTATGGCTGG CTGTCCCGGG GATTGCAGGC GGCCGGACGG
CTCGGTGGTA TCGCGGCACC TTCGTGGCCG GCGGGGCGAC CGCTGGTGCG CATCGACCAC
GTGCTGGTCA GTCGCGAATG GGAAGTGCTC GGCGGCGCCG TGCCGGCCGC CGGACTCTCG
GATCACCGTC CGGTGATCGC CCGCCTGCGC TGGCGCCGGA CTTCCGCCAG CCCTGGAACG
TGCCCGTTTG ATGCCCCGAC GGCGAATCCC TGA
 
Protein sequence
MLQLVSGSLL GLFGLAYAAY WIPPEAAWWL QLLAVGLPLL VAALGVLALV LLWQRRWLMA 
GGALLALLLY GLRHGWPGGA EPSGAEADDT LVVMTYNVPE SRRPALGDSL QALVLRYRPQ
LIGFQEVGVW RYEQRGRPST VRLIGHLRPL VERQGFRFSV PDPTRGPMFA EVVTLTRLPV
VRQEIRLLER GPEGLIYQAV RSELCWAGRL FVHYNVRLQS YGPVKPWEVL RDGGWKRPAN
WRRWLGAYRR AMLQRAAQVR QLRAWIDQEE LPVILSGDFN STPDQWFYGW LSRGLQAAGR
LGGIAAPSWP AGRPLVRIDH VLVSREWEVL GGAVPAAGLS DHRPVIARLR WRRTSASPGT
CPFDAPTANP