| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0806 |
|---|
| Symbol | |
|---|
| ID | 8567444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 924236 |
|---|
| End bp | 925258 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Porphobilinogen synthase |
|---|
| Protein accession | YP_003290091 |
|---|
| Protein GI | 268316372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGC AAACGACACA GAGCGTGACG CTTTCGCTGA TCGAGCGTCC CCGTCGGTTG
CGCCGGACCG AAGCCATCCG GCGCATGGTG CGCGAAACGC GCCTGTCGGT GGACCAGCTC
GTAGCGCCGC TGTTCGTCGT CGAGGGCCAC GGCGTGCGCC AGGAAGTGCC CTCGATGCCG
GGCCAGTACC GGCTCAGCAT CGACGAACTG GTACGGGAGG CGCGGGAGCT GCACGCGCTG
GGCATCCCGG CCGTGGCGTT GTTTCCGGCG CTGGACGAAT CGCTCAAGAC GCCCGACGGC
CGCGAGGCGT TCAACCCGGA CGGCCTCTAT CCCCGGGCCA TCCGGGCAGT CAAGGAGGCC
GTGCCCGAGC TGCTGGTCAT CACCGACGTG GCGCTGGACC CCTACTCGTC GGATGGTCAC
GACGGCATCG TACGCGACGG CCGCATTCTC AACGACGAGA CGGTGGAGAT CCTGGCCCGG
ATGGCCGTTG TGCAGGCGCA GGCCGGCGCC GACATCGTGG CCCCCTCGGA CATGATGGAC
GGCCGCGTGG GCGCCATCCG CCGGGCACTT GACGAAGCCG GCTTCACCGA AGTGGCGATT
CTCTCCTACA CGGCCAAATA CGCCTCGGCC TTCTACGGGC CCTTCCGGGA TGCGCTCGAC
TCGGCCCCGC GCCATCGGCC CGGCGTCCCG CCGGACAAGA AAACCTACCA GATGGACCCG
GCCAACGCCC GTGAAGCGCT GCGCGAGCTG CGGCTGGATC TGGAAGAAGG CGCCGACATG
GTCATGGTCA AGCCGGCGCT CCCTTATCTG GACGTCATCT ATCGGGTAAA GCAGGCTTCT
GATGTGCCGG TGGCCGCCTA CCACGTCAGC GGCGAGTACG CCATGCTCAA AGCGGCCGCG
CTGAACGGCT GGCTCGACGA AAAAGCCGCG GTGCTCGAAG CGCTCACGGC CATCTGTCGC
GCCGGTGCCG ACGTGATCCT CACCTACTTC GCCAAACAGG TAGCGCAATG GCTGCAGAAG
TAA
|
|---|
| Protein sequence | MEMQTTQSVT LSLIERPRRL RRTEAIRRMV RETRLSVDQL VAPLFVVEGH GVRQEVPSMP
GQYRLSIDEL VREARELHAL GIPAVALFPA LDESLKTPDG REAFNPDGLY PRAIRAVKEA
VPELLVITDV ALDPYSSDGH DGIVRDGRIL NDETVEILAR MAVVQAQAGA DIVAPSDMMD
GRVGAIRRAL DEAGFTEVAI LSYTAKYASA FYGPFRDALD SAPRHRPGVP PDKKTYQMDP
ANAREALREL RLDLEEGADM VMVKPALPYL DVIYRVKQAS DVPVAAYHVS GEYAMLKAAA
LNGWLDEKAA VLEALTAICR AGADVILTYF AKQVAQWLQK
|
|---|
| |