Gene Rmar_0703 details

Gene Information

• Locus tag: Rmar_0703
• ID: 8567340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 810572
• End bp: 812680
• Gene Length: 2109 bp
• Protein Length: 702 aa
• Translation table: 11
• GC content: 66%
• Product: surface antigen (D15)
• Protein accession: YP_003289989
• Protein GI: 268316270

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.528109
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGCG GGCGTTGTCG GATCGGGATC GTCGCGGCAC TGCTGCTGGG GCTGGTGCGG 
CCGCTCATGG CGCAGGCGCC GCTGTGGCTG GTCAACGAGC GCACCACGAT CCGGACCATT 
TCGTTTCGGT TCGTGGACAC GAAAAGCTTC GAGGAGGACC AGCTCCGGGC GCAGATGGTG 
CTGCAGGCGC CGTCCTGGTG GGATCGTGTC AAAGGCTGGC TGCCGTTCGT CTCCCCGGCC 
CATTACCCGT TCGATCCCAT CGAACTGGCC CGCGACGTGG TACGGCTTCG CCGCTTCTAT 
GCCCGCAACG GCTTTCTGCA TACGGAGATC ACCTATCCGG CCTCGCAGCT CGACACCGTA 
CGCAACCAGA TCCACATCGT GCTGAGCATT CGCGAGGGGC CGCCGCTCGT CATCCAGGAC 
GTGGGCTTCT TCGATCCGGA GGATCGCTAT CTGGTGACCA CGCTCGATCC GGAGCTGCGG 
GAGCGATGGC GTCGATTTCG GGATCAGATC GCCTTTCGGG TGGGCGACCG CTACACTGAA 
GCGCGGCGCG TGGAGATTCA GGACGCCGTG CTGAACTGGT TTCGCGACCG GGGCTATGCC 
TTTGCACGCG TGCGTTCCGA CGCCCGTATC GATTCGACCT TCAACACGGT GGACCTGCGC 
TTCGTGGTGG ACACGGGGCC GCGCGGCTAT TTTTCGGAAA TTCAGATCGA AGGCAATCGG 
CGGGTGAGCG ATCGGGTACT GCGCCGGGAG CTGCCGTTCC GCGAAGGCGA TGTGTTCGCG 
CAGCGTAAGG TGGTGGAAGG ACAGCGCCAG CTGTTCGGGC TGGAGATCTT CCGCGTGGCG 
CTGGCCGACA TCCCGCCGCA GCCACGCGAC AGCACGGTGA CCGTACGCTA CCGGGTGGCC 
GAGTCGGCGC TGCGTTTTCT GGTGCTGCAG GGCGGCTTTG GCCGCAGCGA GGGGCTCGGG 
GCCGAGGTGC GCTGGACGCA TCGCAACTTT CTGGGCGATG CCCGCACGCT GACGCTGAAC 
CTGGCGGCGC AGACCGGCCT GCTGGCCCGT CGGGGACCGG GCACGCCACC CCCCCGGCTG 
TTTCGCTTCA GCGCGCTGTT TCGCCAGCCC TATCTGTTTT CGCGGCGGAT GGAGCTGCTG 
CTCTCACCCT TCCTGGAGTA TCAGCGCGAT CCGCTGCTGG AAGACAGCGA CGAGCCGCTC 
CAGATCAACA CGCGCGAGTT CGGTCTGAAC ACCACGCTGT TTTATGAAAT CTATCCGTTT 
CGCACCGTTA CGTTGCAGCA CGCCTTCAGC CGGGCGCTGC AGCTCACGCA GCAGCGGCGC 
GACACGACGA GCACGCGCGA CCTGTTCGAC AAAAGCATCC TGTCGCTGAC GGCCACCTTC 
GGCCGCACGA ACAACTACTT TAATCCCCGG CGCGGCTATC TCATCCGACC GTTTGCCGAA 
CTGGGCGGTG GGCTCATCGG CTCGGAGATC GAATACTACC GGCTGGGAGC CGAGCTGACG 
GGCTACCTGC CGCTCACGCG CCGGAGCGTG CTGGCCGGTC GTCTGCTTTT CGGGCGTCTG 
GAGCCGCTGG GGCGCAGCCG CGAGGCGCTG GCCGGCCGTC TGGGGCGCAC CGATAGCCTG 
CGCTACGAGA ACCGCTTCGA CCCGATCCTT TTCTACGCGG GCGGTAGCAG CGACGTGCGT 
GGCTGGGGAC TGCAACAGCT CGGACCGAAA GTAACCCGTC TGCAGATCAG CGACGGTGAT 
ACGACGATCT ACTACGAGCC GATCGGGGGC AACCGGAAGC TGTTGCTGAA CCTGGAGCTG 
CGCTTTGGCC TGCCGGGACT CGGCAGCGAC TGGCAGGGCG CCGCCTTTCT CGATGGCGGC 
CAGCTCGGCC AGGATCGGCT GGTGCTGCGC ACGACGGCGT TCCGATGGGC GGCCGGTCTG 
GGCGTGCGTT ACCAGACGCC CGCCGGTTTT ATCCGGCTCG ATCTGGCCTA CAAGCTCAAT 
CCGAGCTACG AGGACCTGCG CGATCCGGCC GACGTGTACC GCTATCGCCA GGGATTGACG 
GATCGCCCTC CGGAGGTCCA CTGGCAACGC CGCCTGCGGT TGCACCTGAG CATCGGCCAG 
ACGTTCTGA 

 

Protein sequence

MKRGRCRIGI VAALLLGLVR PLMAQAPLWL VNERTTIRTI SFRFVDTKSF EEDQLRAQMV 
LQAPSWWDRV KGWLPFVSPA HYPFDPIELA RDVVRLRRFY ARNGFLHTEI TYPASQLDTV 
RNQIHIVLSI REGPPLVIQD VGFFDPEDRY LVTTLDPELR ERWRRFRDQI AFRVGDRYTE 
ARRVEIQDAV LNWFRDRGYA FARVRSDARI DSTFNTVDLR FVVDTGPRGY FSEIQIEGNR 
RVSDRVLRRE LPFREGDVFA QRKVVEGQRQ LFGLEIFRVA LADIPPQPRD STVTVRYRVA 
ESALRFLVLQ GGFGRSEGLG AEVRWTHRNF LGDARTLTLN LAAQTGLLAR RGPGTPPPRL 
FRFSALFRQP YLFSRRMELL LSPFLEYQRD PLLEDSDEPL QINTREFGLN TTLFYEIYPF 
RTVTLQHAFS RALQLTQQRR DTTSTRDLFD KSILSLTATF GRTNNYFNPR RGYLIRPFAE 
LGGGLIGSEI EYYRLGAELT GYLPLTRRSV LAGRLLFGRL EPLGRSREAL AGRLGRTDSL 
RYENRFDPIL FYAGGSSDVR GWGLQQLGPK VTRLQISDGD TTIYYEPIGG NRKLLLNLEL 
RFGLPGLGSD WQGAAFLDGG QLGQDRLVLR TTAFRWAAGL GVRYQTPAGF IRLDLAYKLN 
PSYEDLRDPA DVYRYRQGLT DRPPEVHWQR RLRLHLSIGQ TF