Gene Rmar_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0522 
Symbol 
ID8567156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp587721 
End bp590057 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content71% 
IMG OID 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003289812 
Protein GI268316093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACG AAGCTCAGGA AAAAGCCTGT GCGGAGCTGG TCGAGCAGTC GGCGGCCGAA 
GCGGACGGGC TGGTGCAGGT GGAGGTGGAT CCGGCTTCGG GGCGGCTGAC GCTCACCTAC
GACCGGGCGC GGCTCTCGGC GGCCGAAGCC GAGCGACTGG CGCGGCGTCT GGCGGCCGCC
TTCGAGGAGC GTCCGGCCCG CTGCACGCTG CACGTGCAGG AGCAGGGCGG CCGCAGCTGC
GAAACGTGCG CGCTGGCGCT GGAGCGTCGG TTGCAGGCGT TGCCGGGCGT GCGCCAGGCG
CGCGTGTCGT TCCGGGGCGG TGTGCTTCAC GTCGTCTATG ACGCCGCGCA GACCACGCCG
GAGGAGCTGG CCCGCGTGGT CGAACGCTTC GGCGTGCGCA CGCTGCCTCC GAAGCCGGAA
GTCTCCTGGC GTCTCTGGCT CGAGGGTACG CGACGCGAGG CGCTGTTCGT GGCGCTGACG
CTCGCCGGAC TCGTCACGGG CTGGCTGGCC GGACGGCTGG GCGCGCCGCT CGTGGCGGCC
GTGGCCTACG GCGTGGCGTA CGTGTTCGGC GGCTGGGACG GGCTGCGCAA CGGGATCGGC
GCGCTCCGGC ACCGGACGGT CGATGTGGAC CTGCTCATGG TGCTGGCCGC GCTCGGCGCG
CTTGTGATCG GGGCGCCGGC CGAAGGCGCC ACGCTGCTTT TCCTGTTTTC CCTTTCCAAC
TTGCTCCAGC ATTACGCGAT CGGCCGCTCG CGTCGGGCCA TTCAGGCGCT CATGGAGCTG
CGGCCCGATC GGGCCCGCGT GCTGCGCGAG GGACAGGAAG TCGAGGTGCC CGTCGAAGAG
GTCCGGGTGG GTGAAGTCTT CGTGCTGCGG CCGGGCGACC GTGTGCCGCT CGACGGCGTG
ATCGTTCGCG GCGAAAGCGC TCTGGACGAA TCGTCCATCA CGGGCGAGTC GATGCCCGTC
GACAAAGGGC CGGGTCAGGA GGTGTTCGCC GGTACGATCA ACACGACGGG TAGCCTGGAG
GTGCGCGTGA CGCGTCCGGC TTCGGCCTCG ACGCTGGCCC GCATGATCGA ACTGGTCGAG
CAGGCCCAGA GCGAAAAGGC CGTCACGCAG CGGCTCATCG ATCGGCTTGA GCAGCCCTAC
GCGCTGGGCG TGCTGGCGAT GACGGCGCTG GCCATCGTGA TTTCCGTGGC TTTTCTGAAC
GAGCCGTTCG CCCGCGCTTT TTACCGGGCC ATGACGCTGA TGGTGGCCGC TTCGCCCTGC
GCCGTGGTGA TCTCGACGCC GGCTGCCGTG CTTTCGGCCA TCGCAGCGGG GGCCCGACGG
GGCGTGCTCT TCAAAGGCGG CGTCTATGTG GAGGCGCTGG CGCGCGTGCG GGCGATCGCC
TTCGACAAGA CCGGCACGCT GACCGAGGGG CGCACGCGCC TGGTGCAGGT GGGCGCGCGC
CCCGGCGTGG GGCTTTCCGA AGACGAACTG CTGCGGCTGG CTGCGGCCGT GCAGCAGCGC
TCGGAGCATC ATCTGGCGCG GGCCACCGTA GCGGCGGCCC GTGAGCGGGG ACTGACGATT
TCGGAGGCCG AGGGTTTTCA GGCTGTGGTG GGCAAGGGCG TTCGGGCCGT GGTCGAAGGC
GCCACCCTGC ACGTGGGCAA CCTGCGCTAC TTCGAGGCAG CGTGGCAGGC GGCGGACGGA
TTCGACGAAG GTCGGGCGGC CGTCGAAGCG CTGGCCCGAC AGGGACGGAC GGCCGTGCTG
GTGGCCCGCG AACGCGACGG GCAGCGTGAG GTGCTGGGCT GGCTGGCCTT CGCCGATCGG
CTGCGGCCGG GCGCGGCCGA AACGATCCGC CGGTTGCGTG CGCTGGGCGT TGCGCATGTG
GCGCTGCTGA CCGGCGACAA CCGGCACGTG GCCGAGGCGA TCGGGCGCGA GGCCGGCGTC
GATGCGGTGC ACGCCGAGCT GCTTCCGGCC CAGAAGGTGG CGCACGTCAA GGCGCTGGTC
GATCGCTACG GCGCGGCGGC CATGGTGGGC GACGGCGTGA ACGACGCGCC CGCGCTGGCG
GCCGCCACCG TCGGGATTGC CATGGGCGGC GCCGGCACCG ACGTGGCGCT GGAGACGGCC
GACGTCGTGC TCATGCGCGA CGATCTCGGG CAACTTCCCT ATGTGCTGGC GCTCAGCCGG
GCCACACGCC GCACGCTACT GGTGAACTTT GCGATCGCCT TCGGCATGAT GGGCCTGATG
ATCGGCGCCA TTCTGCTGCA GGGATTGCCG CTTCCGCTCG CTGTCGTCGG CCACGAAGGG
TCCACCGTGC TCGTCTCGCT CAACGGATTG CGCCTGCTGG GCTTTCGGGC GTCGTGA
 
Protein sequence
MADEAQEKAC AELVEQSAAE ADGLVQVEVD PASGRLTLTY DRARLSAAEA ERLARRLAAA 
FEERPARCTL HVQEQGGRSC ETCALALERR LQALPGVRQA RVSFRGGVLH VVYDAAQTTP
EELARVVERF GVRTLPPKPE VSWRLWLEGT RREALFVALT LAGLVTGWLA GRLGAPLVAA
VAYGVAYVFG GWDGLRNGIG ALRHRTVDVD LLMVLAALGA LVIGAPAEGA TLLFLFSLSN
LLQHYAIGRS RRAIQALMEL RPDRARVLRE GQEVEVPVEE VRVGEVFVLR PGDRVPLDGV
IVRGESALDE SSITGESMPV DKGPGQEVFA GTINTTGSLE VRVTRPASAS TLARMIELVE
QAQSEKAVTQ RLIDRLEQPY ALGVLAMTAL AIVISVAFLN EPFARAFYRA MTLMVAASPC
AVVISTPAAV LSAIAAGARR GVLFKGGVYV EALARVRAIA FDKTGTLTEG RTRLVQVGAR
PGVGLSEDEL LRLAAAVQQR SEHHLARATV AAARERGLTI SEAEGFQAVV GKGVRAVVEG
ATLHVGNLRY FEAAWQAADG FDEGRAAVEA LARQGRTAVL VARERDGQRE VLGWLAFADR
LRPGAAETIR RLRALGVAHV ALLTGDNRHV AEAIGREAGV DAVHAELLPA QKVAHVKALV
DRYGAAAMVG DGVNDAPALA AATVGIAMGG AGTDVALETA DVVLMRDDLG QLPYVLALSR
ATRRTLLVNF AIAFGMMGLM IGAILLQGLP LPLAVVGHEG STVLVSLNGL RLLGFRAS