Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0423 |
Symbol | |
ID | 8567057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 464148 |
End bp | 465011 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003289715 |
Protein GI | 268315996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.985837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTGA CCCGCCGACA GGCACTGCGC ACGCTGGCCG GGGCGGCCGC GCTCGGCAGC ATGGGCGCTC CCCTAGTGCT GACCTCCCGC AATCGGCCGC AGTTCAAAGG GCGCATCAAA CATTCCGTCT GCAAATGGTG CTACCCGAAC CTGAGTGTCG AGGAGCTGGC AGCGGCAGGC GTCAAAATGG GGCTGCAGTC CATCGAATTG CTGGACCCGC CCGACTGGCC CATCGTCAAG AAGTACGGCC TCACCTGTGC CATGGGGAAT GGCCCCTCCC GCATCCCGGA CGGCTTCAAT CGCCGGGAAA ACCACGAATG GCTCATCCCA CAGTTCAAAA AGCGGATCGA AGAGGCCGCC GAAGCGGGTA TCCCCAACAT CATCTGCTTT TCGGGCAACC GCAACGGCAT GGACGACGAG GAAGGACTGG AAAACTGTGT GATCGGCCTC AAGGAAATCC TGCCGACGGC CGAAAAGTAC GGGGTCACGA TCTGCATGGA GCTGCTCAAT AGCAAGATCG ACCACCCCGA CTACATGTGC GATCATACGG AATGGGGCGT GCGGCTCGTC AAGCGCCTGG GCTCCGAGCG CTTCAAGCTG CTCTACGACA TCTATCACAT GCAGATCATG GAAGGCGACA TCATCCGCAC GATTCGAGAG AACATCGAGT ACATTGCCCA CTTCCACACG GCCGGTGTGC CGGGTCGCCA CGAGATTGAC GATTCGCAGG AATTGTATTA TCCTGCGATC ATGCGGGCCA TTGCCGACGC AGGATTCGAC GGATTCGTGG CCCAGGAATT CATTCCCACC GCCGACGATC CACTGGAATC GCTCCGTCGT GCCATCGCCA TCTGTGACGT GTGA
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Protein sequence | MALTRRQALR TLAGAAALGS MGAPLVLTSR NRPQFKGRIK HSVCKWCYPN LSVEELAAAG VKMGLQSIEL LDPPDWPIVK KYGLTCAMGN GPSRIPDGFN RRENHEWLIP QFKKRIEEAA EAGIPNIICF SGNRNGMDDE EGLENCVIGL KEILPTAEKY GVTICMELLN SKIDHPDYMC DHTEWGVRLV KRLGSERFKL LYDIYHMQIM EGDIIRTIRE NIEYIAHFHT AGVPGRHEID DSQELYYPAI MRAIADAGFD GFVAQEFIPT ADDPLESLRR AIAICDV
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