Gene Rmar_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0162 
Symbol 
ID8566787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp176073 
End bp176612 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID 
Productcytochrome c oxidase subunit II 
Protein accessionYP_003289458 
Protein GI268315739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCGC CGCTGAAACC ACTGGAAGGG AACTGGTGGG GCATTCCGGC CAACCGCTAC 
GAGAAGCTCT GGGTTCAGAT CAGTGTGGTG TGGGGGCTGA TTCTGTTCGG CTGGATGGTC 
GGCTGGAGCT TCTTCGGCAA CCAGAACCAG CACGGCCCCA CCTATCGGAT CGAGCCGGCC 
ACCTACCGGG CCAAACTCGC CGCCTATCGC GAGGCCAGCA CGGCCACCGA GCAGGGGTTG 
CGCCCGGCCG GTGAGGACGT GTACATCGCG GCCATGCGGT ACGGCTTCGA CGGGCTGCCC 
GTGATCCTGA AGGCCGGCAA GACCTATCGG CTGCACCTGA CCAGCTACGA CGTGCAGCAC 
GGATTTTCCA TTCGGCCCGA GCATGCGCTC AGTAAGCAGG TCACGTTTCA GCTGCTGCCC 
GGCTACGAAT GGGTGATTCC CATGCGCTTC GACGAGCCGG GCGTCTATCA CGTGATCTGC 
AACGAGTTCT GCGGCATCGG GCACCGCACC ATGCATGGCA TTTTCATCGT GGAGGAATGA
 
Protein sequence
MSSPLKPLEG NWWGIPANRY EKLWVQISVV WGLILFGWMV GWSFFGNQNQ HGPTYRIEPA 
TYRAKLAAYR EASTATEQGL RPAGEDVYIA AMRYGFDGLP VILKAGKTYR LHLTSYDVQH 
GFSIRPEHAL SKQVTFQLLP GYEWVIPMRF DEPGVYHVIC NEFCGIGHRT MHGIFIVEE