Gene Rleg_6232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6232 
Symbol 
ID8016244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp290549 
End bp291874 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content55% 
IMG OID644827537 
ProductO-antigen polymerase 
Protein accessionYP_002978737 
Protein GI241258853 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.394036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.503415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGT ACACGCTTAG AATAGCGAAT GGGCCGACTG CCAGTTGGCG AACAATAGAG 
TGCTGGGGCG CCGGCCTCTG CCTTTTTCTT CAGACAGGCG CGCTTTTCCC GCTAATGTTG
GCGGATGCCG ACGGAGGCCT TAGCGATCAT GCCAGGTCGA TATTGCGTCT GCTTTGTCTA
CCCGTATACG GGTTTACATT GCTGATGCTG GCACGAAATT TTCCGCACTT CATCACAGCG
CTGAAGCGAA ATTGGTTTGT CCCGCTGATG GTCGCTATGC CCTTCTTGTC CGTCTTCTGG
TCGGTTGGCC CGTCGACGAC TTTCAGGCGT GCCATCGGCC TGCTCTTCAC GGTTCTTTTG
GCTTATGTAT TGGCAATACG CTTTACGCCG AGGCAGCTGC TTCTCATTGC ATTTGCGACC
TTCGGAACAT GTATCGTCCT CAGCCTTTTG CTTCTTGTGG TGTCACCGGG GCTCGCTCGC
ATGCCCACGG ACAGCGCGGT GCGCGGCATA TTCATCCACA AGAACAGCCT TGGTTGGTAC
GCCGGCATGA TGATACTGGT GTCGACCGCC GTCGTAATGG ACGGCAACCG AGGCTTGCGG
CGAACCGCTT TGATCTTGCT GATGGCGGGC GGGGCTTGTC TCTTCCTTTC CGGATCGATG
ACCGCGACAA TTGCGACGGT ATCGGCATAT TGCCTGATCG GATTCTACTC CATGTTGCAG
CGAATCCGTG GCATCGGTCG GATCGTCTTC ATCCTGTTTT TTGTTCAAAT GTTCGTCGGG
ATCCTCCTTT TGCTTCATGA ATTCCTGGTC CCTTTCCTTG AGGCGCTTGG CAAGGATGCC
ACGTTGACGG GCCGAGTGCC CTTGTGGGAA CTTGTCGACG GTCAGATCGC CGATCATCTC
CTGCTCGGCT TCGGCTACCA GGCGTTTTGG ACAGAAGCGA ATCCCGAAGC GTGGATTATC
TGGTCAAAGA TCCAATGGAT GGCTCCCCAC GCCCATAATG GATTCCGCGA TACGCTGCTG
AGCTTCGGAA TAAGCGGAAT GACTTTGTTC GCTCTGATGC TTTTGCAGGC ACTCCGCCAA
GGGGCGGCCC TACAATGCGG GGACCCGCGT TATGGCTGGC TCTGGCTGAA CGTCTTCACG
GTTGTGGTTT TGGTGATGAA CCTGACCGAG ACAATCTTCC TTATCCAGAA TGACGCGATT
TTCATTCTGT TCACAACAGC CATCATCATG TTCTCTCTAT ACAAGCCTGT TGTTGTTTCG
ACGGCTCCCG GCCGGCAACT GCGAGCATCG GCCCGCAGCC CAACGGCGGA GCTGCAAATC
TCATGA
 
Protein sequence
MRAYTLRIAN GPTASWRTIE CWGAGLCLFL QTGALFPLML ADADGGLSDH ARSILRLLCL 
PVYGFTLLML ARNFPHFITA LKRNWFVPLM VAMPFLSVFW SVGPSTTFRR AIGLLFTVLL
AYVLAIRFTP RQLLLIAFAT FGTCIVLSLL LLVVSPGLAR MPTDSAVRGI FIHKNSLGWY
AGMMILVSTA VVMDGNRGLR RTALILLMAG GACLFLSGSM TATIATVSAY CLIGFYSMLQ
RIRGIGRIVF ILFFVQMFVG ILLLLHEFLV PFLEALGKDA TLTGRVPLWE LVDGQIADHL
LLGFGYQAFW TEANPEAWII WSKIQWMAPH AHNGFRDTLL SFGISGMTLF ALMLLQALRQ
GAALQCGDPR YGWLWLNVFT VVVLVMNLTE TIFLIQNDAI FILFTTAIIM FSLYKPVVVS
TAPGRQLRAS ARSPTAELQI S