Gene Rleg_5480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5480 
Symbol 
ID8016789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp66213 
End bp67430 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content60% 
IMG OID644827648 
Productplasmid partitioning protein RepA 
Protein accessionYP_002978848 
Protein GI241518220 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA TGACGACCCG CAAGCCAACG AGCGAATCCT CCGCTGCGAA GATTACACGC 
CAAGCGCAGA TGTTGTCAGC GCAGTTGCAG TCTCTTCGCA CCCATATGTA TCCGCCGGAG
GCGATGAAAT CGTTGCGCAC CTTTACCTCG CGCGACGTGG CCACCATGCT TGGGATCGCC
GAATCGACGC TCCGACAGAT GTCGTTGGAC GGCGAAGGCG CAATGCCCGA GAGGCTGGAG
AATGGCCGCA GGAGCTACAC GCTCGCCCAG GTCAATGAGA TCCGTCGATA CCTGGCGGTG
AAGCGGCCCA TGGAAGCCTT GGATTTCTTT CCGCGCCGGC GTCCCGGTGA GAAGTTGCAG
GTTATCGCGG TTGCGAACTT CAAGGGCGGA TCGGCCAAAA CGACGACGAC CGTTCATCTC
GCCCATTATC TTGCTCTGAC GGGTTTGCGG GTGCTCGCGA TCGATCTTGA CCCGCAGGCA
TCCTTGTCGG CCATGTTCGG CTATCAGCCG GAGTTCGATG TCAGCGACAA CGAGACCATA
TATGCGGCGA TTCGCTATGA CGACGACAAC CGCCGGCCGA TGCGCGACGT CATTCGCAAA
ACCTATTTTG ACGGAATCGA TCTCATACCC GGCAACCTGG AGCTCATGGA ATACGAGCAT
GAGACGCCGC AGGCGATCGC AAGCGGCGGC GGGCGCGGCG ACGGGATCTT CTTCCGGCGG
CTCGGCGCCG TCATAAACAG CGTCGAGGAA GACTACGATG TCGTCGTCAT CGACGCGCCG
CCGCAACTGG GCTATCTGAC CCTGGGCGCG CTTTGTGCGG CGACCTCGCT GCTGATCACC
GTTCATCCGG CGATGATCGA CGTTGCCAGC ATGAACCAGT TCCTGGCAAT GATGAGCGAT
GTCATGCACG TCATCGAGGA GCGTGGCGGT GTTCTGGAAC ACGATTTCAT CCGATATGTC
ATCACCAGGC ACAATCCGAA CGACGTCCCG CAGGTGAACG TCGTCGCGCT CCTGCGCTCC
CTGTTCGGCG AGGACGTGCT GGCGCCAGCG GTGGTGGACA CGACCGCGAT TGCCAGCGCC
GGCCTTGAGA AGAAGAGCCT TTACGAAATG GCGCGTGGTT CGGTTGGTCG AGACACGCTC
ACGCGCGCCC TGGATTCCGT CGACGCAGTC AATCTCGAGA TCTTCAACCA CCTCAAATCG
GTATGGGGAC GGTCATGA
 
Protein sequence
MDQMTTRKPT SESSAAKITR QAQMLSAQLQ SLRTHMYPPE AMKSLRTFTS RDVATMLGIA 
ESTLRQMSLD GEGAMPERLE NGRRSYTLAQ VNEIRRYLAV KRPMEALDFF PRRRPGEKLQ
VIAVANFKGG SAKTTTTVHL AHYLALTGLR VLAIDLDPQA SLSAMFGYQP EFDVSDNETI
YAAIRYDDDN RRPMRDVIRK TYFDGIDLIP GNLELMEYEH ETPQAIASGG GRGDGIFFRR
LGAVINSVEE DYDVVVIDAP PQLGYLTLGA LCAATSLLIT VHPAMIDVAS MNQFLAMMSD
VMHVIEERGG VLEHDFIRYV ITRHNPNDVP QVNVVALLRS LFGEDVLAPA VVDTTAIASA
GLEKKSLYEM ARGSVGRDTL TRALDSVDAV NLEIFNHLKS VWGRS