| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5162 |
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| Symbol | |
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| ID | 8007058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | + |
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| Start bp | 566463 |
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| End bp | 568088 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822072 |
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| Product | Choline dehydrogenase |
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| Protein accession | YP_002973332 |
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| Protein GI | 241113497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0769143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATTC GTGTAAATGA TGCAGCCATT GATGCGGGAA GCTACGACAT CATCATCGTC
GGCGCGGGAT CGGCGGGATG CGTTCTGGCC AACCGGCTAT CGGCCGATCC GAAAACCCGC
GTCCTGCTGC TCGAAGCCGG CGGCAGCGAC CGGTACCATT GGGTGCATGT ACCGATCGGC
TATCTCTACT GCATGGGCAA TCCGCGCACC GATTGGATGA TGAGGACGGC GGCGGAGGCC
GGACTGAACG GTCGGTCACT GCCCTATCCG CGTGGAAAAG TGCTGGGCGG CTGTTCGTCG
ATCAACGGCA TGATCTACAT GCGCGGCCAG GCGGCCGATT ACGACGGCTG GCGGCAGGCG
GGTAATTCCG GCTGGGGCTG GGACGACGTG CTGCCCTATT TCCTGAAATC CGAGGACAAC
TATCGTGGCC AGTCGCCAAT GCACGGGGCA GGCGGCGAAT GGCGGGTGGA AAAGCAGCGG
CTGTCCTGGC CGATCCTCGA TGCCTTTCGC GATGCCGCCG AAGAACTCGG CATCCCGAAG
ACCGACGATT TTAACGATGG CGACAATGAA GGCTCGGGCT ATTTCGAGGT CAACCAGCGC
GGCGGCCTGC GCTGGAACAC GACCAAGGCC TTCTTGCGCC CGGCGATGAA GCGGCCCAAT
CTGCGTGTGC TGACCGGCGC CGAAACCGAG CGGCTGGAAT TCGAGGGCAG AATGGTGACC
GGCGTGCGGT TCCGGCTGAA CGGACGGAGT CATCTGGCTC GCGCCGGTCG CGAGGTCATT
CTGTCTGCCG GTGCGATCAA TTCGCCGAAA ATCCTTGAGC TTTCCGGGAT CGGTCGACCG
GATGTGTTGT CGGCTGCTGG GCTGGACGTC GTCCACGAAC TTCCAGGTGT CGGCGAAAAC
CTGCAGGATC ATCTGCAAAT CCGCACGGTC TTCCGCATCG AGGGCGCAAA GACGCTGAAC
CAGCTCTATC ACAACCTGTT CACCCGCGCG GGCATGGGGC TTGAATATAT GCTGCGCCGG
TCCGGGCCTC TGTCGATGGC GCCGAGCCAG CTCGGTATCT TTGCCAAGAG CGATCCGGCT
GTTGCGACCG CCGATCTCGA ATATCACGTG CAGCCCTTGA GCACCGACCG GCTCGGCGAG
CCGCTGCACA AATATCCCGC CGTCACCGTC TCCGTCTGCA ATCTGCGGCC GGAGAGCCGG
GGGAGCGTGC ATGTTAGCGG CCCGAACCTT TCGGTGGCGC CGGAAATACG CCCGAATTAT
CTTTCGACCG TCGGCGACCG GATGGTTGCG ACGAAATCGA TCCGGCACGC CCGCCGGCTC
ATGGAGGCCG GTGCCATCGC CAAGTACCGG CCGCAGGAGA TGTTGCCGGG CACGGAATAC
CGGACCGACG AGGACCTGAT CCGTCGTGTC GGCGATATCG CCACGACGAT CTTCCATCCG
GTCGGCACCT GCAAGATGGG CAGCGACACG ATGGCGGTTG TTGATTCGCA ATTGCGGGTG
CATGGGCTGG CGAAACTGCG GGTGGTCGAT GCCTCGATCA TGCCGACAAT CGTGTCGGGC
AATACCAACT CGCCGGTGAT CATGATTGCC GAGAAGGCCG CGGAAAGCAT TCTATCAGGG
GTGTGA
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| Protein sequence | MNIRVNDAAI DAGSYDIIIV GAGSAGCVLA NRLSADPKTR VLLLEAGGSD RYHWVHVPIG
YLYCMGNPRT DWMMRTAAEA GLNGRSLPYP RGKVLGGCSS INGMIYMRGQ AADYDGWRQA
GNSGWGWDDV LPYFLKSEDN YRGQSPMHGA GGEWRVEKQR LSWPILDAFR DAAEELGIPK
TDDFNDGDNE GSGYFEVNQR GGLRWNTTKA FLRPAMKRPN LRVLTGAETE RLEFEGRMVT
GVRFRLNGRS HLARAGREVI LSAGAINSPK ILELSGIGRP DVLSAAGLDV VHELPGVGEN
LQDHLQIRTV FRIEGAKTLN QLYHNLFTRA GMGLEYMLRR SGPLSMAPSQ LGIFAKSDPA
VATADLEYHV QPLSTDRLGE PLHKYPAVTV SVCNLRPESR GSVHVSGPNL SVAPEIRPNY
LSTVGDRMVA TKSIRHARRL MEAGAIAKYR PQEMLPGTEY RTDEDLIRRV GDIATTIFHP
VGTCKMGSDT MAVVDSQLRV HGLAKLRVVD ASIMPTIVSG NTNSPVIMIA EKAAESILSG
V
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