Gene Rleg_5137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5137 
Symbol 
ID8006997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp537941 
End bp539494 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content63% 
IMG OID644822050 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002973310 
Protein GI241113475 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.398593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.644601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGG ATTTTCATTT CCTGCGTCCC TGGCTCCTGC TCCTTCTCGT ACTGCCGGCC 
GTGATCCTCT GGATGGTCTC ACGCTCCGGC GACATCCGTG CACAATGGAA GGGCATGATC
GCGCCGCATC TGCTCGACCG CCTCGTCGTC GATACTTCGG GACGCTCACG AATGCGGCCT
TCCTGGTTGC TGGCTCCCCT CCTCGCCACC GGGATCGCTG GAGCGGCAGG ACCGACATGG
CAGCGCGAAC CGCCGCCCTT CGTCGAGGAC ACGGCGCCTC TCATCATCGC CGTCGACCTG
TCGCAGACAA TGGACGCCAT CGACGTGACC CCGTCCAGGC TGGAGCGGGC GAAACTCAAG
ATCAAGGATG TGATCGAGGT CCGACAGGGC GCGCGCACCG CGATCATCGC CTATGCCGGC
ACCGCGCATC TGGTCCTGCC GCCGACCGAG GACGCGGCGC TGCTTGAAAG CTACTCCGAG
GCATTGGCGA CACGCATCAT GCCAACGCCG GGCAAGGACA CGGCAGCTGC CCTGCTGCTC
GGGCAAAGTC TGCTGGACAA AGAGGGGGTC GCCGGCACGA TCCTGCTGCT GACCGACGGA
GTGGAAGCCG CTGCTGTGCA GACACTCAAG TCGAGCGGCG ACGGCGTCGT CATTCTCGGG
ATCGGCACTT CGGCGGGCGG GCCGGTCAAG ACGCCGGATG GCGGATTTCT CTCGGATGCA
TCCGGCGCAC GTCTCTTTCC CAAGCTCGAC GTCGCCGGGC TCCAGGCCGT CGGCAGGGAA
GCGGGGGCTG ATGTCGCGAC AATCACAGAC GACGACACGG ATGTTCGCTG GATCATGCAG
CGTATCCGCA GCAATTTCGC ACAGAAGCAG GAGACAGAGG GTGACCGCTG GCGCGATCTC
GGCTGGTGGC TGGTCGTGCC GGTCGCGGTC GCGATGGCCC TGTCGTTCCG CAAGGGCTGG
GTGGTGCGGA TCGCCATGCT GCTGCTCGCC CTGCGGATGC TGTCGCCGGG CAGCGCCCAT
GCGGAGGGAC TGATCGAGAT GTGGCTGACT GCCGATCAGC AAGGCCGCAT TGCCTTCGAG
CGGGGCAAGT ACGACGAGGC CGCAAACCAC TTTGCCGATC CGATGTGGAA GGGCGTCGCC
CTCTATCGAG CCGGCAAATT CGAGGAGGCG ATCGACGCCT TTGCTTCCAT CGATACGGCG
GAGAGCTGGT ACGACCAAGG CAATGCTCTC CTCCAACTAT CGAAGTTCGA GGAGGCTGTC
GCAGCCTATG AGAAGGCTCT CGATAAACGA AGCGAATGGC CGGATGCCGA GGCGAACCTC
ACTGTTGCGC GGCAACTGCT GAAGCAACAG AAGGAAAAGC AGGAAGAACA GCCTGAACAG
CCGAGCGAGA ATCCTGACAG CGTCCAGTTC GACGAGAAGG GAAAGGAGGG CAACGAAGGT
CAGATTGATA TTGCCGAGCA GACGTCAGAG ATGTGGATGA AGAACATCAA TGTCAGCCCG
GCGGACCTGC TGGCCCGCAA GTTTTCCCTC GAGGCGAGGA GGCGGTCGCC ATGA
 
Protein sequence
MITDFHFLRP WLLLLLVLPA VILWMVSRSG DIRAQWKGMI APHLLDRLVV DTSGRSRMRP 
SWLLAPLLAT GIAGAAGPTW QREPPPFVED TAPLIIAVDL SQTMDAIDVT PSRLERAKLK
IKDVIEVRQG ARTAIIAYAG TAHLVLPPTE DAALLESYSE ALATRIMPTP GKDTAAALLL
GQSLLDKEGV AGTILLLTDG VEAAAVQTLK SSGDGVVILG IGTSAGGPVK TPDGGFLSDA
SGARLFPKLD VAGLQAVGRE AGADVATITD DDTDVRWIMQ RIRSNFAQKQ ETEGDRWRDL
GWWLVVPVAV AMALSFRKGW VVRIAMLLLA LRMLSPGSAH AEGLIEMWLT ADQQGRIAFE
RGKYDEAANH FADPMWKGVA LYRAGKFEEA IDAFASIDTA ESWYDQGNAL LQLSKFEEAV
AAYEKALDKR SEWPDAEANL TVARQLLKQQ KEKQEEQPEQ PSENPDSVQF DEKGKEGNEG
QIDIAEQTSE MWMKNINVSP ADLLARKFSL EARRRSP