Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5137 |
Symbol | |
ID | 8006997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 537941 |
End bp | 539494 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644822050 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002973310 |
Protein GI | 241113475 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.398593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.644601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGG ATTTTCATTT CCTGCGTCCC TGGCTCCTGC TCCTTCTCGT ACTGCCGGCC GTGATCCTCT GGATGGTCTC ACGCTCCGGC GACATCCGTG CACAATGGAA GGGCATGATC GCGCCGCATC TGCTCGACCG CCTCGTCGTC GATACTTCGG GACGCTCACG AATGCGGCCT TCCTGGTTGC TGGCTCCCCT CCTCGCCACC GGGATCGCTG GAGCGGCAGG ACCGACATGG CAGCGCGAAC CGCCGCCCTT CGTCGAGGAC ACGGCGCCTC TCATCATCGC CGTCGACCTG TCGCAGACAA TGGACGCCAT CGACGTGACC CCGTCCAGGC TGGAGCGGGC GAAACTCAAG ATCAAGGATG TGATCGAGGT CCGACAGGGC GCGCGCACCG CGATCATCGC CTATGCCGGC ACCGCGCATC TGGTCCTGCC GCCGACCGAG GACGCGGCGC TGCTTGAAAG CTACTCCGAG GCATTGGCGA CACGCATCAT GCCAACGCCG GGCAAGGACA CGGCAGCTGC CCTGCTGCTC GGGCAAAGTC TGCTGGACAA AGAGGGGGTC GCCGGCACGA TCCTGCTGCT GACCGACGGA GTGGAAGCCG CTGCTGTGCA GACACTCAAG TCGAGCGGCG ACGGCGTCGT CATTCTCGGG ATCGGCACTT CGGCGGGCGG GCCGGTCAAG ACGCCGGATG GCGGATTTCT CTCGGATGCA TCCGGCGCAC GTCTCTTTCC CAAGCTCGAC GTCGCCGGGC TCCAGGCCGT CGGCAGGGAA GCGGGGGCTG ATGTCGCGAC AATCACAGAC GACGACACGG ATGTTCGCTG GATCATGCAG CGTATCCGCA GCAATTTCGC ACAGAAGCAG GAGACAGAGG GTGACCGCTG GCGCGATCTC GGCTGGTGGC TGGTCGTGCC GGTCGCGGTC GCGATGGCCC TGTCGTTCCG CAAGGGCTGG GTGGTGCGGA TCGCCATGCT GCTGCTCGCC CTGCGGATGC TGTCGCCGGG CAGCGCCCAT GCGGAGGGAC TGATCGAGAT GTGGCTGACT GCCGATCAGC AAGGCCGCAT TGCCTTCGAG CGGGGCAAGT ACGACGAGGC CGCAAACCAC TTTGCCGATC CGATGTGGAA GGGCGTCGCC CTCTATCGAG CCGGCAAATT CGAGGAGGCG ATCGACGCCT TTGCTTCCAT CGATACGGCG GAGAGCTGGT ACGACCAAGG CAATGCTCTC CTCCAACTAT CGAAGTTCGA GGAGGCTGTC GCAGCCTATG AGAAGGCTCT CGATAAACGA AGCGAATGGC CGGATGCCGA GGCGAACCTC ACTGTTGCGC GGCAACTGCT GAAGCAACAG AAGGAAAAGC AGGAAGAACA GCCTGAACAG CCGAGCGAGA ATCCTGACAG CGTCCAGTTC GACGAGAAGG GAAAGGAGGG CAACGAAGGT CAGATTGATA TTGCCGAGCA GACGTCAGAG ATGTGGATGA AGAACATCAA TGTCAGCCCG GCGGACCTGC TGGCCCGCAA GTTTTCCCTC GAGGCGAGGA GGCGGTCGCC ATGA
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Protein sequence | MITDFHFLRP WLLLLLVLPA VILWMVSRSG DIRAQWKGMI APHLLDRLVV DTSGRSRMRP SWLLAPLLAT GIAGAAGPTW QREPPPFVED TAPLIIAVDL SQTMDAIDVT PSRLERAKLK IKDVIEVRQG ARTAIIAYAG TAHLVLPPTE DAALLESYSE ALATRIMPTP GKDTAAALLL GQSLLDKEGV AGTILLLTDG VEAAAVQTLK SSGDGVVILG IGTSAGGPVK TPDGGFLSDA SGARLFPKLD VAGLQAVGRE AGADVATITD DDTDVRWIMQ RIRSNFAQKQ ETEGDRWRDL GWWLVVPVAV AMALSFRKGW VVRIAMLLLA LRMLSPGSAH AEGLIEMWLT ADQQGRIAFE RGKYDEAANH FADPMWKGVA LYRAGKFEEA IDAFASIDTA ESWYDQGNAL LQLSKFEEAV AAYEKALDKR SEWPDAEANL TVARQLLKQQ KEKQEEQPEQ PSENPDSVQF DEKGKEGNEG QIDIAEQTSE MWMKNINVSP ADLLARKFSL EARRRSP
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