Gene Rleg_5095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5095 
Symbol 
ID8007392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp487212 
End bp488093 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content60% 
IMG OID644822009 
Productbeta-lactamase domain protein 
Protein accessionYP_002973269 
Protein GI241113434 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.046641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.029207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT CGGTGGAGTT GTGTTCATAT CCCGAACTCG ATGATCGTAT CGTGATCGTC 
AGGGCGGGGG ACGAAGTTGA TGCCGTGTTC GTCCGGACCG AGAGGTTCAA TGTGCTGATC
GATACGCTCG GAACGCCCGA ACTCTGCATG GCGGCACTGA ACCTGCTCGA GGCACAGACG
AACGCTCGTC CGCTGATCGT CGTCAATTCG CACATGGATT GGGATCATTT CTGGGGAAAT
GCCGCCATTG CCGGGCGCGC GCCCATTATC GCGCATGCCG CCGCGCTCGA CCGTTTGCGC
GCCCCTTCCG CACGCGAGGT CCTGAGGGAC AAGGCGAGCC AGGAGTCGAG GTTTCGGAAC
CTCGACCTTA TCGGTCCCGA TATCACCTTC TCCGCCTCTA TGACCCTCAA CGGCGGCGAT
CTGACGCTGG AGCTCATTCA TACACCGGGA CACACGCCCG ACCATATCGC CGTATGGATT
CCGGAACTTC GCGTCTGCCT GGCCGTCGAC GCAGTGGAAT ACCCGATCCC CGAAGTCTGG
AGCAAAAATG CAGGCGACCT TCGCTTGATC CGTTCCTCGC TCGAGCGGAT CCGTGACCTC
AATGCAAGAC TGGTCATCCC TGCGCACGGC CGGACGCACT CCCCTTCGGC GGTGGATGAC
AACCTCGCCT ATTTCCAAGC CTTGGCCAAT CGTGTCGGCA GTATGAGCGA GAGCCAGCTG
GCGGACCCGC AACTCGGCAG TTCAAGCGGC TTGCGGTTGG AAGACTTCGT CCTCATCCCC
GACGGAATGG CCTCCGACAC GGCGGCATTC TATCGGCAGT GCCATGAGAC AAACCTTGGC
GCGACGGTTC AGGCCCATCA CGAAAAACTG AAATTCGCCT AG
 
Protein sequence
MNPSVELCSY PELDDRIVIV RAGDEVDAVF VRTERFNVLI DTLGTPELCM AALNLLEAQT 
NARPLIVVNS HMDWDHFWGN AAIAGRAPII AHAAALDRLR APSAREVLRD KASQESRFRN
LDLIGPDITF SASMTLNGGD LTLELIHTPG HTPDHIAVWI PELRVCLAVD AVEYPIPEVW
SKNAGDLRLI RSSLERIRDL NARLVIPAHG RTHSPSAVDD NLAYFQALAN RVGSMSESQL
ADPQLGSSSG LRLEDFVLIP DGMASDTAAF YRQCHETNLG ATVQAHHEKL KFA