Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4249 |
Symbol | |
ID | 8015031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4351717 |
End bp | 4352376 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644826819 |
Product | alanine racemase domain protein |
Protein accession | YP_002978028 |
Protein GI | 241206932 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.405464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTC AAGAGCGCTT AGACGACGTG CGGTCGCGGA TCGCCGCTGC GGAACGCGAA GCAGGTCGTC CGGCGGGTTC CGTTCAGCTC GTCGCGGTGT CGAAGACCTT CGAGGCGGAC GCGATCCGCC CGGCCATCGA AGCCGGACAG CGTGTCTTCG GTGAGAACCG GGTGCAGGAA AGCCAGGGCA AGTGGCCGGC GCTGAAGGCC GAGCATCAGG ATATCGCGCT GCATCTGATC GGACCGCTGC AATCAAACAA GGCGGCGGAT GCGGTGGTGC TTTTCGACGT CATCGAGACG GTGGATCGGG AAAAGATCGC CCGCGCACTT GCCGAGGAGA TGAGGCGGCA AGGCAAGGCG CTGCGGCTCT ATGTCCAGGT CAATACCGGG CTCGAACCGC AGAAGGCCGG CATCGCTCCT GACGACACGC CAGCCTTCGT CGCTCTCTGC CGCGACGAAC TCGGCCTTTC CATCGAAGGG TTGATGTGCA TTCCGCCGGC CGAGGAAAAT CCTGGGCCGC ATTTCGCCCT GCTGGCAAAG CTTGCGCTCA AATGCGGCGT CGAAAAACTT TCCATGGGCA TGTCGGGCGA CTACGGGACG GCGATCGCCT TTGGCGCCAC CAGCGTGCGT GTAGGGTCAG CGATTTTCGG CACGCGCTGA
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Protein sequence | MELQERLDDV RSRIAAAERE AGRPAGSVQL VAVSKTFEAD AIRPAIEAGQ RVFGENRVQE SQGKWPALKA EHQDIALHLI GPLQSNKAAD AVVLFDVIET VDREKIARAL AEEMRRQGKA LRLYVQVNTG LEPQKAGIAP DDTPAFVALC RDELGLSIEG LMCIPPAEEN PGPHFALLAK LALKCGVEKL SMGMSGDYGT AIAFGATSVR VGSAIFGTR
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