Gene Rleg_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4249 
Symbol 
ID8015031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4351717 
End bp4352376 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID644826819 
Productalanine racemase domain protein 
Protein accessionYP_002978028 
Protein GI241206932 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.405464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC AAGAGCGCTT AGACGACGTG CGGTCGCGGA TCGCCGCTGC GGAACGCGAA 
GCAGGTCGTC CGGCGGGTTC CGTTCAGCTC GTCGCGGTGT CGAAGACCTT CGAGGCGGAC
GCGATCCGCC CGGCCATCGA AGCCGGACAG CGTGTCTTCG GTGAGAACCG GGTGCAGGAA
AGCCAGGGCA AGTGGCCGGC GCTGAAGGCC GAGCATCAGG ATATCGCGCT GCATCTGATC
GGACCGCTGC AATCAAACAA GGCGGCGGAT GCGGTGGTGC TTTTCGACGT CATCGAGACG
GTGGATCGGG AAAAGATCGC CCGCGCACTT GCCGAGGAGA TGAGGCGGCA AGGCAAGGCG
CTGCGGCTCT ATGTCCAGGT CAATACCGGG CTCGAACCGC AGAAGGCCGG CATCGCTCCT
GACGACACGC CAGCCTTCGT CGCTCTCTGC CGCGACGAAC TCGGCCTTTC CATCGAAGGG
TTGATGTGCA TTCCGCCGGC CGAGGAAAAT CCTGGGCCGC ATTTCGCCCT GCTGGCAAAG
CTTGCGCTCA AATGCGGCGT CGAAAAACTT TCCATGGGCA TGTCGGGCGA CTACGGGACG
GCGATCGCCT TTGGCGCCAC CAGCGTGCGT GTAGGGTCAG CGATTTTCGG CACGCGCTGA
 
Protein sequence
MELQERLDDV RSRIAAAERE AGRPAGSVQL VAVSKTFEAD AIRPAIEAGQ RVFGENRVQE 
SQGKWPALKA EHQDIALHLI GPLQSNKAAD AVVLFDVIET VDREKIARAL AEEMRRQGKA
LRLYVQVNTG LEPQKAGIAP DDTPAFVALC RDELGLSIEG LMCIPPAEEN PGPHFALLAK
LALKCGVEKL SMGMSGDYGT AIAFGATSVR VGSAIFGTR