| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3555 |
|---|
| Symbol | |
|---|
| ID | 8014417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3590003 |
|---|
| End bp | 3590743 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644826120 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002977340 |
|---|
| Protein GI | 241206244 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAC CCCTTTCCAC CAAGATCGCC CTCGTCACCG GCGGCTCGCG CGGCATCGGT
GCCGCTATCG TCCGAAGGCT CGCCGCTGAT GGCGCCGCCG TCGCCTTCAC CTATTCCAGC
TCGGAGCACA AGGCGAAGGC GATCGTCGCC GAGCTGGAGG CTGCTGGCGG CAGGGCGCTG
GCGATCCGGG CCGACAGTGC CGATGCGAAG GCCGTACAGG ATGCCGTCGC GTTGACAGCC
GGGCATTTTG GCGGTCTCGA CATTCTCGTC AGCAATGCCG GCATTCTCAT CCTCAACCCG
CTCGACGACT ATTCGCTCGA AGATTTCGAC CGGATGTTCG CCGTCAACGT CCGCGCTGCC
TTCGTCGGCA TCCAGGCAGC GGCAAGACAC ATGAAGGAAG GCGGCCGCGT CATCACCATC
GGCAGCGTCA CCGCCGATCG CAGCGGCTTT CCAACCTCCG CAGTCTACAG CATGACGAAG
GGCGCAATCG CCTCGATGAC CCGCGGCCTC GCCCGCGATC TCGGCCCACG CGGCATCACC
GTCAACAACA TCCAGCCCGG CCCGACGGCG ACCGACATGA ACCCCAATGA GGACGATCAT
CAGCGCCTCA AGCCGCTGAT GGCACTTGGC CGCCTGGGTG AGGACCGCGA GATCGCCGGC
CTCGCCGCCT ATCTCGCCAG TGCCGAGGCC GCTTTCGTCA CCGGCGCCAG CCTGACGATC
GACGGCGGTT ATCTCGCCTG A
|
|---|
| Protein sequence | MSQPLSTKIA LVTGGSRGIG AAIVRRLAAD GAAVAFTYSS SEHKAKAIVA ELEAAGGRAL
AIRADSADAK AVQDAVALTA GHFGGLDILV SNAGILILNP LDDYSLEDFD RMFAVNVRAA
FVGIQAAARH MKEGGRVITI GSVTADRSGF PTSAVYSMTK GAIASMTRGL ARDLGPRGIT
VNNIQPGPTA TDMNPNEDDH QRLKPLMALG RLGEDREIAG LAAYLASAEA AFVTGASLTI
DGGYLA
|
|---|
| |