Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3345 |
Symbol | |
ID | 8014227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3348113 |
End bp | 3350638 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644825904 |
Product | hypothetical protein |
Protein accession | YP_002977131 |
Protein GI | 241206035 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.172568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00479246 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGGATT TTATTGCAGT CATTCGGCGG GCCGTCGACG GCCTGGCTGA AAATACCCCC GAGATGCGGG TGAAGGTCTA CGAACGTGCC CGCGGCGCAG TGCAGCGGCA GCTCGAGAAC ATGAAGCCGC GTCCGCCGGA AGCCATGCTG CAACGCCAGC TCGAAAAGCT CGAGGCTGCC ATCCGCGAAG TGGAAGGCGA ACACTCCGAG GCGATGCCGC TCGACGAGCC GGTTGCAGCC GTCACCGCGT CGGAATCCTT CGAAGAGCAA GCGGTTCACG ACGAAAGCGA ACCGGCGCCG GAGACGGCAG TCGAGGAACC GGCATACGAA GCCTATGCGG AACCGCAGGC GGCCGAGGCC GCCGACGAGC CCGATCACGT GGAAGCCGCC GCACCGCAGC AGGCTGAGGA AGAGGTCGCT GCCGAGGAAC CTCTTTCCCA GGAAACACTC GTTTCCCCTG AAACAGCCGC TCCCGCGGAA ACCCCTGTTT CCGCCGAGAC ACCGGTTTCG CCGGAGACAT CCGGTCCGGC CGAAACATAC TGGCATCCCT CGCATGAGGA GGAAGCGCCG GCCGAGGAAT GGCATGCCAG CGAGGCGCGC GACGTCGCTG CTGAAGACGT GCCGGCCGAA CATGGCGGCT GGGAGCCGCC TGCCGCGCAT CGCAGCGAGC AAGCCGACGA AGACCGTGCC GACGGGCAGC ATGCCCTGGA AGCCGACGAG ATCGCGGCCG AACCGGCGGC GGTGGAAAGC GAGGAGCCGG AGGCCGAGGA GGCTTACGAG CCCGTCGAGC CGTTGCAGCC GATCACCCGC GGCATAGATC ATGCATCCAA CCGCCTTGTA GAGCCGGTCG CCGATTTCGA TCGTCCGCAG GAGTTCGTCG AGCACAGCCG CGAGGAGCCG TTGCAGGCCG AAGCTGCGGC GCATTTCGAC CCCGTCTGGA CCGAGCCCGT TGCCGAAACG CCGGCTCCGG CGCCCAAGGA TGCGGAGACC GAATGGGCGG AAGAGGAACT CCGGCAATAT TCGGAGACGG CGCCGGCGCC GATTACCGCC GATGCCTCGG CGCGCGCCTT CGAGGAGGTG ATATCGAGCC TCGAAAAAGT GGCACCCGCC GCCATCATGC CGGCCGCCAA GGAAAGTTTT TCCTGGGAGA CGGCCGCCTT CGACGATCTG CCGCCGATCG AGGCCGACAG CGGTAAGAAG ACACCGGTTG CCTCTCATTT CGACGATGTC GATATTTTCG CGGAAGTGCA CAACGGCAAG CCGGCGCCCG CTAGCGGCGC GCCGAGCGAG GACTGGCGAG AAGCGAAAGC GCTGCGCGGC TACGACCGCC GCGGCTCGGT CGCCGCTGAC GACGATGACG CCAATCCGTC GATGGATATC GATCAGATTG TCGCCTCCAA GCTGCAGGGC AAGAGCTTCC GTATGGAACC GAAGCGCCGC CGCTTCGGCA TCGGCACCGT GATCACGCTC ATCTTCGCAC TCATCCTGAT TGGTGGCGGC GCCTATGCAG GCTGGACGAA CAGAGAGGCA TTGGTGGCGA TGGTCGACGG GCTCGTCAGC TCGGCACCGT CGCAGGCGAC CAGGAACGAG GCGGCAACGC CGCCGGACGG TTCGTCGACG CCTGCCCAGC CGGGCGCGGT GACGCCAGCC CAGCCGACCG CACCAGGAGC GCAGAATACT CCAGCGACGC CGGCACAGCC GAACCCGCAG GTAGCGTCAA TGAACAATGA CGGCGCTGCG GCCAATTCGA AATTCACCCA GCGGCTGCTG ACTGATGGAA CTGAGGTCGA TAGCGGACCG GCGACCGTGC CGGGAACGCC GACCGCGGAA GGAAAATCGG TGGCCGAACA GAATGTCGCG GCAGCCGATA CGCCGCCTGC CAGCGCGCAG GGTGATGCGG CACCCGCCGC CACGCCGACG CCGAACGGTG CGGCGGCATC GCCGCCGCAG GCCGCGCCCG TCGGTTCGTC GCAAAAGATG TTCCTCTATG AGGAGCGCAT CGGCCAGAGC TCGCCGACGG CGATCGAGGG ATCGGTCGTC TGGAGCGTGC AGCACGAGGC CGGCCAGGGC GGCCGGCAGG AGGCGACGGT GCAGGGCAAT GTCACGGTTC CTGAGCGCAA TCTCTCGGCT CTCGTCACCT TCAAACGCAA TTCCGATCCG TCGCTGCCGG CAAGCCATCT CGTCGAGATC GTCTTCTCGG TGCCGCCGAA TTTCGAAGGC GGCAGCATCG ACAGTGTCCA GCGCATCTCG ATGAAGCGCA CGGAACAGGA CCGCGGCGAT GCGCTGATCG CGGTTCCGGC CAAGATCACC GACGATTTCC ATATGATCGC GCTCAACGAC TACCCTGATG CGCGCAAGGC CAATCTCGAC CTGATGTCGA CCCGCAACTG GATCGATATT CCGATCACCT ACCGCAACGG CCGCCGCGCG CTGCTGACGA TGGAAAAGGG CGGTACGGGA ACGGACGCCT TCAATACTGC GATCAAGGAA TGGACCGCGC TCGGAGATGT GTCGACGAGC CAATGA
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Protein sequence | MADFIAVIRR AVDGLAENTP EMRVKVYERA RGAVQRQLEN MKPRPPEAML QRQLEKLEAA IREVEGEHSE AMPLDEPVAA VTASESFEEQ AVHDESEPAP ETAVEEPAYE AYAEPQAAEA ADEPDHVEAA APQQAEEEVA AEEPLSQETL VSPETAAPAE TPVSAETPVS PETSGPAETY WHPSHEEEAP AEEWHASEAR DVAAEDVPAE HGGWEPPAAH RSEQADEDRA DGQHALEADE IAAEPAAVES EEPEAEEAYE PVEPLQPITR GIDHASNRLV EPVADFDRPQ EFVEHSREEP LQAEAAAHFD PVWTEPVAET PAPAPKDAET EWAEEELRQY SETAPAPITA DASARAFEEV ISSLEKVAPA AIMPAAKESF SWETAAFDDL PPIEADSGKK TPVASHFDDV DIFAEVHNGK PAPASGAPSE DWREAKALRG YDRRGSVAAD DDDANPSMDI DQIVASKLQG KSFRMEPKRR RFGIGTVITL IFALILIGGG AYAGWTNREA LVAMVDGLVS SAPSQATRNE AATPPDGSST PAQPGAVTPA QPTAPGAQNT PATPAQPNPQ VASMNNDGAA ANSKFTQRLL TDGTEVDSGP ATVPGTPTAE GKSVAEQNVA AADTPPASAQ GDAAPAATPT PNGAAASPPQ AAPVGSSQKM FLYEERIGQS SPTAIEGSVV WSVQHEAGQG GRQEATVQGN VTVPERNLSA LVTFKRNSDP SLPASHLVEI VFSVPPNFEG GSIDSVQRIS MKRTEQDRGD ALIAVPAKIT DDFHMIALND YPDARKANLD LMSTRNWIDI PITYRNGRRA LLTMEKGGTG TDAFNTAIKE WTALGDVSTS Q
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