Gene Rleg_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1675 
Symbol 
ID8012744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1668642 
End bp1669916 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content62% 
IMG OID644824262 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_002975501 
Protein GI241204405 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTC GTAGGTTTTC CAAGGGCATA ACATCGCTCG TTCTTCTTTC GTCGCTTGCA 
TCGCCGTCCT TCGCCGGTGG TCTGGAGCGC GGCGGATATA ATATCGACCT TCTCTTCGAC
AATTCGAGGT TCGCCGTCCA GTCCGGCGCG ACCTATGTCA TGCCACAGCG CAAGCTGAAA
AACGTCAAGG ACACCGATGC CACCGATGGC CTCGGCACCA ACGGCATTGG CGGCGGCTCG
ACCACGGCGG ATGATACCGA GGATTACTGG GTCCCCTATC TCGGGGTGAA GGTTGGTCTC
GGCGACTCCA TCGACTGCAT GGGCGATTTT TCGACACCCT TCGGTGCACA TACCAATCCC
GGCGCTGACT GGCTGGGCGT CAACGACAAC ATCGAAACCA AGATCAGCAC CCGCAACTAC
GGCGCCACCT GCTCCTATCG TTTCGATATG GGCCCCGGCC AGCTCCGCCT GATCGGCGGC
GGCTTCTATC AGACGGTCGA TGGTTTCAAG ACACGCCTCG TCGCGCCGAT CACAGGGGCG
GCCGCGCTGG TCTATGACGG CACCGGTCGT CTCGACCTTG CCGACCAGGC CATGGGATGG
CGGGCGGGCA TCGCCTACGA AATCGAGGAA TATGCCTTCC GCGCCAGCCT GGTCTATAAC
AGCAAGGTCA AGTATGACGA TCTCACCGGC ACGGTCGACC TGACAGAGGT GCCGAAGGCC
GTCAGTCCCA CCAATCCCTA CCTCGGCGTC GTGACGCCGG TCTACGGCTC GGCCGAGGCG
CCGGATTCCG TCGAGCTCAA GTTGCAGAGC GGCATTGCGC CCGATTGGCT CGCCTTCGGT
TCGGTCAAGT GGACGAACTG GAGCGTGCTG CAGTCGATCG CCTTCTGCCC GAAGGCCACT
AAGGGCGTCG TCGCCTGCTC CGCCAGCAGC CAGCTCACCT CGCTCGATCT CTTCTATCGC
GACGGTTGGA CGGTCAGCGG CGGCGTCGGC CACAAATTCA ACGAGCAATG GGCCGGCGCC
CTCAGCCTGA CTTGGGATCG CGGCACGAGC CAGGGCTACG GCGCCCAGAC CGACACATGG
ACGCTCGGTG CAGGTGTTTC TTATACCCCG GTGGAGAATG TCGAATGGCG TCTGGCCGGC
GCGCTCGGCA TCATGACCGG CGGAGAATCC GGCACCTACG TCTATAATGG CCGGACCTAC
GGCAACGACG TCTCCTATTC CTTTGGCGAC GATCTGCTTG CAGCCCTTTC CACCAGCGTA
AAGGTCAAGT TCTGA
 
Protein sequence
MASRRFSKGI TSLVLLSSLA SPSFAGGLER GGYNIDLLFD NSRFAVQSGA TYVMPQRKLK 
NVKDTDATDG LGTNGIGGGS TTADDTEDYW VPYLGVKVGL GDSIDCMGDF STPFGAHTNP
GADWLGVNDN IETKISTRNY GATCSYRFDM GPGQLRLIGG GFYQTVDGFK TRLVAPITGA
AALVYDGTGR LDLADQAMGW RAGIAYEIEE YAFRASLVYN SKVKYDDLTG TVDLTEVPKA
VSPTNPYLGV VTPVYGSAEA PDSVELKLQS GIAPDWLAFG SVKWTNWSVL QSIAFCPKAT
KGVVACSASS QLTSLDLFYR DGWTVSGGVG HKFNEQWAGA LSLTWDRGTS QGYGAQTDTW
TLGAGVSYTP VENVEWRLAG ALGIMTGGES GTYVYNGRTY GNDVSYSFGD DLLAALSTSV
KVKF