| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1661 |
|---|
| Symbol | |
|---|
| ID | 8012729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1653379 |
|---|
| End bp | 1654128 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644824246 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002975487 |
|---|
| Protein GI | 241204391 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.731962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC TGACTGACAA GGTCGCCGTG ATCACCGGCG GCGGGAGCGG CATCGGCCTG
GCGTCAGCCA AGCTCTTCGC CCAGGAAGGC GCAACGGTCG TCATCGTCGG GCGCAATAAG
GATGCGCTCG ACAAAGCCGC CGCCGAAATC GGCGGCAGCG CGGCGGCGAT CGTCGCGGAT
GTCGCGGACC TGGACGCGCT GGACGCGCTC TATGCGGAGG TCGGCAAGCG TTTCGGCAGG
ATCGACGTGA TCTTTGCCAA CGCGGGCGTC AACAATCTCG CGCCGTTCGA GGCGGTAACG
GTTGAGGATT TCGACACCCA GTTCAACGCC AATGTTCGCG GTCTCTTCTT CACCGTGCAG
AAGGCGCTGC CGCTGCTCAG CGATGGGGCA TCGGTGATTC TCAACGCCTC TGTGGCGCAT
GGCAAGGGTA CCCCGATGCA CTCGGTCTAT GCGGCGACCA AGGCGGCCGT ACGGTCCTTT
GCACGCAGTT GGACGACCGA CCTCAAACAT CGGAAGATTC GCGTCAACTC GCTCAGCCCC
GGGCTGGTCG AGACTCCGAT CTTCGGCAAG CTGGGCGTCC CGGCCGAGGC CATCAAGGAA
GGGCTACCCG CGATGCTTGC CCAGATGCCG ATGGGCCGGG TCGGCAGGCC GGAAGAGGCG
GCCACCGTCG CGCTGTTCCT GGCAAGCGCA GACAGTTCGT TCGTGACCGG CATCGACCTT
CCCGTCGATG GTGGAATGGG ACAGGTATAA
|
|---|
| Protein sequence | MAKLTDKVAV ITGGGSGIGL ASAKLFAQEG ATVVIVGRNK DALDKAAAEI GGSAAAIVAD
VADLDALDAL YAEVGKRFGR IDVIFANAGV NNLAPFEAVT VEDFDTQFNA NVRGLFFTVQ
KALPLLSDGA SVILNASVAH GKGTPMHSVY AATKAAVRSF ARSWTTDLKH RKIRVNSLSP
GLVETPIFGK LGVPAEAIKE GLPAMLAQMP MGRVGRPEEA ATVALFLASA DSSFVTGIDL
PVDGGMGQV
|
|---|
| |