Gene Rleg_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1203 
Symbol 
ID8012311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1178797 
End bp1180014 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID644823787 
Productaminodeoxychorismate lyase 
Protein accessionYP_002975037 
Protein GI241203941 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00148773 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGATA CGACGAACCA GAGCAACGAT ACCCAGGCGC AGAAGGGACC GATCATCCCG 
AAGTCGCCGA GCGAAGCCCT GCGTCCGGAA CGCGTTCCGG AGCCGCCGAA GCGGTCCAAG
AAAGCCCGCG GCCAGGTCGT TCTTTTCCTG AACTTCATCA TGACGTTGGC GGTTCTGGTC
TGTGTCGTCG CCATCATCGG CTTCTACTAC GCCACATCGA CCTATCGGAA TCCCGGTCCG
CTGCAGACCA ACACCAATTT TATCGTCCGC AACGGCGCTG GTCTGACCGA AATCGCCTCG
AACCTCGAGC GCAACGCGAT CATCAGCGAT GCCCGCATCT TCCGCTATCT CACGGCAACG
CATCTTTCTG CCGGTGAGAG CCTCAAGGCG GGTGAATACG AGATCAAGGC GAGGGCATCC
ATGAGAGATA TCATGGAGCT GCTGAAATCG GGCAAGTCCA TTCTCTATTC CGTTTCCTTC
CCTGAGGGAC TGACGGTCCG ACAGATGTTC GACCGCATGC TGCAGGATAC CGTGCTGGAA
GGCGACTTGC CGGCGGCATT GCCGACCGAG GGTAGCCTGC GTCCGGATAC CTACAAATTC
TCGCGCGGCA CCAAGCGCTC GGAAATCATC GAACAGATGG CGGCTGCGCA GCAGAAGCTC
GTCGATCAGA TCTGGGACAA GCGCGACTCG TCGCTGCCGC TGCGGTCCAA GGAAGAATTC
GTGACACTCG CCTCGATCGT CGAAAAGGAA ACCGGCGTTC CCGACGAGCG AGCCCACGTC
GCCTCCGTTT TCCTGAACCG GCTCGGCAAG GGCATGCGCC TGCAGTCCGA CCCGACGATC
ATCTACGGCC TCTTCGGCGG CGAGGGCAAA CCGGCCGACC GGCCGATCTA CCAGTCGGAC
CTGAAGCGGG ATACACCTTA CAACACCTAT GTCATCAAGG GTCTGCCGCC GACGCCGATC
GCCAATCCCG GCAAGGATGC GCTGGAAGCC GTCGCCAATC CCTGGAAGAC GCAGGACCTC
TATTTCGTCG CCGACGGCTC CGGTGGCCAT GTTTTCGCTG CGACGCTCGA GGAGCACAAT
GCCAACGTCA AGCGCTGGCG CAAGCTCGAA GCCGACAAGG GGTCGGACCC GAACATCGCA
GTCGACGGCC AGCCGGAAGA GCAGCCGGCG GATAGTGGCA CGACCGTCGC GCCGCCGAAG
AAAAAGAAGA TCAACTGA
 
Protein sequence
MSDTTNQSND TQAQKGPIIP KSPSEALRPE RVPEPPKRSK KARGQVVLFL NFIMTLAVLV 
CVVAIIGFYY ATSTYRNPGP LQTNTNFIVR NGAGLTEIAS NLERNAIISD ARIFRYLTAT
HLSAGESLKA GEYEIKARAS MRDIMELLKS GKSILYSVSF PEGLTVRQMF DRMLQDTVLE
GDLPAALPTE GSLRPDTYKF SRGTKRSEII EQMAAAQQKL VDQIWDKRDS SLPLRSKEEF
VTLASIVEKE TGVPDERAHV ASVFLNRLGK GMRLQSDPTI IYGLFGGEGK PADRPIYQSD
LKRDTPYNTY VIKGLPPTPI ANPGKDALEA VANPWKTQDL YFVADGSGGH VFAATLEEHN
ANVKRWRKLE ADKGSDPNIA VDGQPEEQPA DSGTTVAPPK KKKIN