Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1038 |
Symbol | |
ID | 8012168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1016873 |
End bp | 1017715 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644823621 |
Product | transglutaminase domain protein |
Protein accession | YP_002974872 |
Protein GI | 241203776 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.149694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGATCC GTTACGGCTA TGAAATGACG CTGACCTGCC CGCAGCCGAC CGCATTGGTC TGTCTGCTGT CGGTTCATGA CGATCGCGCG GCCGACATCA GAATTCCGGA AACGGTCTTC ACCACGCCCG ATGTCCCCAC TTCTTCCTAT CGCGATCTCT TCGGCAACCG CTGTCTTCGG CTGGTTGCGC CAGCGGGCGA CCTGACCATA TGGGGCGATG CGACGATCGA AGACGACGGC AAACTGGACA GGTCGCTGCC AGGCGCCAGG GAAGTCCCGG TTTCGGAGTT GCCGGATGAT TGCCTCGTCT ACCTGATGGG CAGCCGCTAT TGCGAGACGG ATCGTCTCAG TCAAATTGCA TGGGATATGT TCGGCACCGT CTCACCCGGC TGGGGCCGCG TTCAGGCGAT CTGCGACTTC GTTCACGGCC ATATCCAATT CGACTACATG CAGGCGCGAT CGACGCGGAC AGCCTTCGAG GCGTTCCACG AACGTGTCGG CGTCTGTCGC GACTTTGCGC ATCTCGCGGT GGCGCTGTGC CGTTGCCTCA ACATTCCTGC CCGATATATC AATGGCCATC TCGGTGACAT CGGTATTCCC GTCGTCGATC CGATGGACTT CAGCGCCTGG ATCGAGGTCT TCCTGGACGG TGCATGGCAT ACATTTGATC CGCGCAACAA CACGCCGCGG ATCGGTCGTA TCATCGTCGC ACGCGGGCGC GACGCCGCCG ACATACCGCT CATCAATTCC TTCGGACCGC ATGTGCTGAA GGCGTTTCGA GTCTGGACCT ATGAGGTGAC GAACGTGGAG CCGATGCAAA ACGTCGCCGA GGAAGCTGTT TAG
|
Protein sequence | MLIRYGYEMT LTCPQPTALV CLLSVHDDRA ADIRIPETVF TTPDVPTSSY RDLFGNRCLR LVAPAGDLTI WGDATIEDDG KLDRSLPGAR EVPVSELPDD CLVYLMGSRY CETDRLSQIA WDMFGTVSPG WGRVQAICDF VHGHIQFDYM QARSTRTAFE AFHERVGVCR DFAHLAVALC RCLNIPARYI NGHLGDIGIP VVDPMDFSAW IEVFLDGAWH TFDPRNNTPR IGRIIVARGR DAADIPLINS FGPHVLKAFR VWTYEVTNVE PMQNVAEEAV
|
| |