Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2979 |
Symbol | |
ID | 6981724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 3040067 |
End bp | 3041692 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643397689 |
Product | Carbohydrate-binding and sugar hydrolysis |
Protein accession | YP_002282472 |
Protein GI | 209550555 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.461822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCT ATTACGTGAA TTCAGCGACA GGATCCGATC ATAACAGTGG AACCGCGGAG AATTCGGCTT TCGCGACATT ATCCGCCGTC GAATCCCTGA GGCTGAACCC TGGCGACAGT GTGCTGCTTG CGGCCGGAAG CGTGTTCAAT GAACAATTCG ATTTGAAATA CTCCGGCAGC GTTGCGGCTC CGATCACCAT TGGCAGCTAC GGTCTTGGCG ACGCCCCGGT CATTCACAGC AGCAATGACG GCATCCATGG TTCCAAGGCC TCGAATATCG TGATCGAGAA TATCAAGATC GCCGATACTG GGGCGAACGC GATATATGCA GGAAACGTGT CGAACTGGGT CGTACGGAAT GTCGAGGTGA GCAATACCGG CCTTGCCGGA AAGCCCGGAT CCGTCAGCTT CCAAAGCAGC CAGAACATCA CCATCGAAAA CAGCACACTG ACCGGTGTCC ATTCCGACGG GATCTGGATG GAAAAGGTCA AGGGCGTCAC CCTGATCAAC AACACCGTCA CCAACAGCCA GGGAAGTGCC GCAGACGCCA TTCAGCTCAA CGACAGCAGC AATATTCTCG TCAAGGACAA TCATCTGGAG CAAACGCAAA CCAACAGCGC CAAAGGTGTC TTGGTACTGG TCCGAGCTCA AGATGCTTTG GTCGAGGGCA ATACGCTCGT TGGCGGCGGC TTCGGGTTGA GCGCGCAGGC GGGCACCAAC ATCGCCATTC ACGACAACAA CATCTCGGGA TATGGCGGCT ACAGCTGGTC CTACGGCATC GGCCTTGGCG ATCAGGGCGA TGCGAAGAAC TACGATATTA GCGGGAATTA TATCCATGAC GGCGTGTATG GGGTTCTGGT CAGCGCCGCC GGCAATCCCG TCTATATCCG CGAGAATATC GATGTTCATG ACAACGTCTT TGACGATCTG TCCTCCTCGG CGCTTAAGGT CGACCGGCCA GCATCGGGCT CCTTCTATGA CAATATCATC GACAGCGATG TATCGACGCT GACGATGCCT GCCACAATCG CTGCGCAAAA CACGTTCTTT GTCGGCGACA ACAAAACATT CGAGCAAGCG CAGGCCGAAC TCGACAGCGC CGCCGGCGGC ACGAATGGTG ATACGTCAAC GAGCCACGAG CAGACGCCTG TTGCACCGGT CGTCGAGCAT CCCGCGGAAA TACCGGCGCA GCCCCAGGTA AGCGCTCCAG TGGCTGCGAC CGAAACGCCG GTCGCGACCA CGCCCTCAGT CGCCGCCCCA AAAATTGTCG CTGTCCACGA CAACTTGAAG ATTTCGGCCG ACACTGGCAG CGCATATCAT GGAAATCTTC TTGAAAACGA CAGTGCCGCC AACGGAAATG TGCTGCTGCG CCGCTTTGGC GACGGTGCCG TGGATAAACA TGGGCTGACG GTAACGGGGA AATATGGTGT GATCCATATC GAAAGCGATG GCGATTACAC CTACACCGTG GACGCGGCGA AAGTCGTCGG GCTTCACGGG AACGTCAGCG AATCCTTCCA GTACAAAATT TCCGACGGTG CTTCGCACAT CGACACGGAC TCGCTGGGTA TCTACATCAA TGTCGATGCA TTTCATTCCA GCCAAGCATC GCACTTGTTG GTGTGA
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Protein sequence | MTVYYVNSAT GSDHNSGTAE NSAFATLSAV ESLRLNPGDS VLLAAGSVFN EQFDLKYSGS VAAPITIGSY GLGDAPVIHS SNDGIHGSKA SNIVIENIKI ADTGANAIYA GNVSNWVVRN VEVSNTGLAG KPGSVSFQSS QNITIENSTL TGVHSDGIWM EKVKGVTLIN NTVTNSQGSA ADAIQLNDSS NILVKDNHLE QTQTNSAKGV LVLVRAQDAL VEGNTLVGGG FGLSAQAGTN IAIHDNNISG YGGYSWSYGI GLGDQGDAKN YDISGNYIHD GVYGVLVSAA GNPVYIRENI DVHDNVFDDL SSSALKVDRP ASGSFYDNII DSDVSTLTMP ATIAAQNTFF VGDNKTFEQA QAELDSAAGG TNGDTSTSHE QTPVAPVVEH PAEIPAQPQV SAPVAATETP VATTPSVAAP KIVAVHDNLK ISADTGSAYH GNLLENDSAA NGNVLLRRFG DGAVDKHGLT VTGKYGVIHI ESDGDYTYTV DAAKVVGLHG NVSESFQYKI SDGASHIDTD SLGIYINVDA FHSSQASHLL V
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