| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2304 |
|---|
| Symbol | |
|---|
| ID | 6981043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 2358977 |
|---|
| End bp | 2361337 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643397017 |
|---|
| Product | protein serine/threonine phosphatase |
|---|
| Protein accession | YP_002281805 |
|---|
| Protein GI | 209549888 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.360239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGGG GGCGATCACT GAAAAGACCG GCAGGCATAG GCTTTCGGGC AAAGTTCATC
CTGGTCGTCG GCGGAGCCGT CCTCTTCGAC CTGCTGGTCA GCGGCGGGCT GGCGCTTTGG
AACGTTCAGA GACTGTCGCG CGACGCAACG CTCGAGGTCG GCCAGGGTCT CGAAGCGGCT
AGCCAGGAAT ACATCCGCAC CTATGCTGAT TCGACCACAG CACAGGTGAG TTTGCTGCTG
CGGCAGGTTC ATAGCGACGT CAGTACGCTC GCCGGCGTGC TGCAGGCGCA GATCGACGAT
CCCGCGCGCA ATTCGGACGT CGGCGCGGCG ATCGCCCGCA CATCTCCCGG CAGCGTCAGC
CTTTCCTACG ATCCGCAGGG AAAGTGGTCT CAGAACGCTC CCGGATCAGT GTCGGTCGTA
AGCGTCTGGG GTTACCTGCT CGGACAAGAC CGGCAGCCAA GGCCGGACGT TGAGAGCGAT
ATCCGCACGA GCGCGGTTCT GGATCTTGTT GCGCCGAGCC TGCTGCAGCA CGGTGCTTCG
AAGCTGCAGA TGTATTACAT CGGCTCGAAA GAACGGCCGA TCTTCAGAAC GGCGCCCTAT
ACCGACCAGG CCCAGACCTT CGACCGCCTT TATCCCGGAC ATAACGAGGC CAACTTCTGG
GACTTTTTTT TCCCCGGACT TTACGAATCC TGGCAGGGCT GGGCCAAGGA TATGAAGACG
CGGCCGGTCG CTGATGACAT CACCCAGACG GCGCCCTATA CAGACGCCAT TACCGGCAAG
CTGATCGTCA GTTTCTTTCA TCCGCTATGG ACAGCCGACA GGCAGGATGT CGCCGGGACG
GCTGGCGCGG ACATCACACT CGACCAGCTC GCGCAGATTG TTGAGAATGT GAAAGTCGCC
CAGTCCGGCT TTGGATTTCT CGCAATGTCC GACGGAAACG TTGTGGCGAT CAACAGCACA
GGAGAAAAAA CGCTCGGTCT GCGTTCTGCG AGCGATGCGA GTGCAGCCGG CGCCTTGACC
GGCCTGGAAC GCTCCCTCAA GGGAAGCTCC CAGCCTGCCA TCGCCAAACT GGCTCTTGAC
CGAGAACAGG GCATTCAGCA CCTGCTGTTG CAGCAGGACG GCAACGACGT CCCCTATATC
GCTATCGTCA AGAAACTGCC GGCGACCAAT CTCTGGGTCA GTGGCCCGGC TCGGCAAGAG
GCGATGTTGC TGGGGGTGGT TGTGCCTGAG CGCGAAATCG ATGCCTCGCT CTATGCGGCC
CAGGCCAAGA TTTCCGAAGC GACGAACCGG ATCGTGCTCT ACCAAATTCT GGCGATCCTG
CTGTCCCTGC TGATCGTGAC GATCGCGGTC TTTGCAGCCT CGAAACGAAT AACCAGCGGG
ATCAGTGCTC TGGCAGGTGC CGCCAAACGG ATCCAGGCGA AGGATTATTC GGTCAGGGTG
GCCATATCGA GCAGGGATGA AGTCGGCGAG GCCGGCGAAG CATTCAATCG CATGGCCGAA
GAAATCAGCT ATCACACGGA AAATCTTGAG CAGCTCGTCG AAGAGCGAAC CGCTCAAATC
GAAGATGCAA AAGAAGAGAT TTCGACGCTG AACGCGCAGC TGCAGCGAGA AAATAGGCGT
CTTGGAACGG AACTCGCCGT CGCCGAGAGA ATCCAGTTGA TGGTGCTTCC GCTGGATCAG
GAGCTCGAGG ACTTTCAGGC GCTCGAGATC GCCGCCTATA TGAGACCCGC GGAAGAAGTC
GGCGGCGATT ATTACGACGT CTTGAAGAAC GGCAGCCGGC TGAAGATCGG CATCGGCGAC
GTCACCGGAC ACGGGCTGGA AAGTGGCGTG TTGATGCTGA TGGTTCAATC CGTCGCCCGC
GCACTGCAGG AAGCCGGAAA CACCGATGCC GTGGAGTTTC TGACACATCT GAACAGCGCC
CTGTTTAAAA ATATCGTCAG GACGAAAATC GATAAGCACC TCACCCTGGC GTTTCTTGAC
TATGACGGAA AAGAGATGAT CCTGTCGGGG CAACACGAGG AAGTTGTCGT CGTCAGGGCA
AACGGCGAGG TCGAACGTAT AGACACCATG GATCTGGGTA TACCGATCGG ACTGGAGGCC
GATATATCCG CTTTCATCAA AACCCGCGAA ATCGCGTTCG AAAAGGGGGA CCTCATACTC
TTGCATACGG ATGGCGTCAC GGAAGCCGAA AACGACGCCG GAGAATTGTT CGGCATGGAC
CGGCTGTGCT GCGAAGCCGT TCGCCTGAGG AACCTGAGCG CTGAGAAAGT CGTTTCCGAA
ATCGTGGCGA CACTCATGCT CTTTATCGGA TCGCAGAAAA TCTACGATGA CATCACGCTT
CTTGCAGTAC GGCATAGGTG A
|
|---|
| Protein sequence | MMGGRSLKRP AGIGFRAKFI LVVGGAVLFD LLVSGGLALW NVQRLSRDAT LEVGQGLEAA
SQEYIRTYAD STTAQVSLLL RQVHSDVSTL AGVLQAQIDD PARNSDVGAA IARTSPGSVS
LSYDPQGKWS QNAPGSVSVV SVWGYLLGQD RQPRPDVESD IRTSAVLDLV APSLLQHGAS
KLQMYYIGSK ERPIFRTAPY TDQAQTFDRL YPGHNEANFW DFFFPGLYES WQGWAKDMKT
RPVADDITQT APYTDAITGK LIVSFFHPLW TADRQDVAGT AGADITLDQL AQIVENVKVA
QSGFGFLAMS DGNVVAINST GEKTLGLRSA SDASAAGALT GLERSLKGSS QPAIAKLALD
REQGIQHLLL QQDGNDVPYI AIVKKLPATN LWVSGPARQE AMLLGVVVPE REIDASLYAA
QAKISEATNR IVLYQILAIL LSLLIVTIAV FAASKRITSG ISALAGAAKR IQAKDYSVRV
AISSRDEVGE AGEAFNRMAE EISYHTENLE QLVEERTAQI EDAKEEISTL NAQLQRENRR
LGTELAVAER IQLMVLPLDQ ELEDFQALEI AAYMRPAEEV GGDYYDVLKN GSRLKIGIGD
VTGHGLESGV LMLMVQSVAR ALQEAGNTDA VEFLTHLNSA LFKNIVRTKI DKHLTLAFLD
YDGKEMILSG QHEEVVVVRA NGEVERIDTM DLGIPIGLEA DISAFIKTRE IAFEKGDLIL
LHTDGVTEAE NDAGELFGMD RLCCEAVRLR NLSAEKVVSE IVATLMLFIG SQKIYDDITL
LAVRHR
|
|---|
| |